Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01523 ATGCACACACTGTATATTTACATATTCCCCGATCTTGCGGCAGCTAGCTACTACGGAACTCCACAGTTCACGCTCTCTTCACAGAGAAAGCTGGAGAATTTGGCGACGTACTTTCAGGGAACTGGCTCAGAAATTCAAGCCTCACCTGAAGGTTTACAGACACTTTACCTTATGAATCCCAACAACTACGTACCATATACTGACAACACTCAGCACCCTGCAACTCCAAACATGTTCTTCCTCAATCCCAGTCTTTCCGGAAACGCGCTCAATCTATCACACCTATCCCACGCGCCATCTCCTACTCCCCAACACCCGTTATATGGTATTACCCTTCCGCCTAACATGACCGGATCCAGAAACTCCGACGATCCAGGCCGTTCATCGTTTCTCTCCCACCATGAAATATCAGGTGTACAAGGCATATCTGCTCCTCGCTTCCAATACCAGTTATGGGGTCCAGTGATCGATCAGACAGCTTCACCGGCGGCTGGAACAGCAACGGCCTGTTCGGGGGGAGTTAACGCTTCCACTGGTCTTGTAGACGGTGCATCTCAGATGGGGTTTTGGAGATCAAGTCAGCAGGGTTTGTCACTGAGCCTTTCGTCACAGCAGAAAACATATAGGTCACTTTCTGGAGAGATTGACGTCCAGACTCATAGTCAACTTCAGGCTTTGTCACCGACATGTGATGGCAGTGACGATATTCGAGTACAAGCTGCTAACTCTCAGTCTTTTGTGTCCAATGGGATTACGGGTATGCAGAGTGCGATATTGGGATCTAAGTACTTGAAGGCTGCTCAAGAACTTTTGGATGAAGTGGTTAATGTAGGACAAGAAGTAAATAGAGTGGAAACAGTGTCTAATGAGAAGATGAAGATGAACACAGAATCAACAACTGCGATAGATTTTTCCTGCAGTACCGGTAATAATAATAGTAAGCAAGGAGCTGATCTAAACACGGCTCAAAAACAAGAACTTCAGATGAAGAAGTCTAAACTTGTTGGCATGCTCGATGAGGTTGAGCAGAGGTACAGACAATATCATCATCAGATGCAAATTGTAGTATCATCATTTGAACAAGCAGCAGGTTTGAGTGTGGCGAAATCATACACAACCCTTGCTTTGAAGACCATCTCAAAGCAATTTCGATGTCTCAAAGATGCAATTTGCTCTCAAATCAAAGTAACAAGCAACAGATTGGGTGAAGATGATTGCTTAGGAGCCAAGAGAGAGGGTTCTAGACTTAGGTTTGTTGATCATCATCTTCAGCAGCAGAAGGCACTGCAACATCTGGGAATGATCCAGCACAATGCTTGGAGACCCCAAAGAGGATTGCCTGAAAGAGCTGTTTCCGTTCTTCGTGCCTGGCTCTTTGAGCATTTCCTTCACCCCTATCCTAAGGACTCGGACAAAGTTTTGCTTGCAAAACAAACTGGACTCACTCGTAGCCAGGTGTCTAACTGGTTCATAAATGCCCGTGTGCGGCTGTGGAAGCCAATGGTTGAAGAAATGTACACCGAGGAACAGAAGGAGCAAGAGCAGAATAATGCCGAGGAGAACTCAAGCAGGTCAAAACAACCCAACAATGAATTAGCACCAGCAGTAACCCCGAAAAAGCTACCTGGAGTTGTTAAAAAAGATCATATGAAGCCTCTTCAGTCCTCGAATCATGAAAACTTCTCCCATCATAATGTTTGTCCTACTGAAATATCAAATTCTTCGATCCTTTCTTCTGCCTTAGGTGGATCAGCACAGTCCCAGTCCGGTTTTGTGCTTATGAGTTCTAGTGACATGCAAAGAAGTCAAAAGAAGACAAGGAATCCTGAAATGCAAAATTGTTCTAGCAGCATAATGTCTCTGGACATGGGTATGAAACCTGGGGAGACAGATACAGAAGCTAATGTGAAATTTGAAATTGACAAGCGAAGCAAGGATGGCTTCTCCTTTTTAAGTGAAAATCCAAATCAAGGTGGTGTTCCATATGGAGTATATTCTATGGGAGATATCGGAAGCTTTAACGTCCCAGAGCAGTTGGCTCCTAGGTTCCATGGAAATGGTGTTTCACTTACTCTTGGCCTTCCCCACAGTGAGAATCTCCCTCTATCAGGAACCCAGCATGGGATGGGATATCTTCCACTCCACAACATGCAGTTAGGTAAGTTTGAGACTGGAGCGAATGGAACAGAGATCAATACCCCGCATTCTTCCTATTCAAGCAATCGATTTGACAACAATATTGACGTACAAAACAGAAAAAGGTTTGATGCTCATAACTTGTTGCCAGACTTTGTGTCTTGA 2301 0.4468 MHTLYIYIFPDLAAASYYGTPQFTLSSQRKLENLATYFQGTGSEIQASPEGLQTLYLMNPNNYVPYTDNTQHPATPNMFFLNPSLSGNALNLSHLSHAPSPTPQHPLYGITLPPNMTGSRNSDDPGRSSFLSHHEISGVQGISAPRFQYQLWGPVIDQTASPAAGTATACSGGVNASTGLVDGASQMGFWRSSQQGLSLSLSSQQKTYRSLSGEIDVQTHSQLQALSPTCDGSDDIRVQAANSQSFVSNGITGMQSAILGSKYLKAAQELLDEVVNVGQEVNRVETVSNEKMKMNTESTTAIDFSCSTGNNNSKQGADLNTAQKQELQMKKSKLVGMLDEVEQRYRQYHHQMQIVVSSFEQAAGLSVAKSYTTLALKTISKQFRCLKDAICSQIKVTSNRLGEDDCLGAKREGSRLRFVDHHLQQQKALQHLGMIQHNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVLLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYTEEQKEQEQNNAEENSSRSKQPNNELAPAVTPKKLPGVVKKDHMKPLQSSNHENFSHHNVCPTEISNSSILSSALGGSAQSQSGFVLMSSSDMQRSQKKTRNPEMQNCSSSIMSLDMGMKPGETDTEANVKFEIDKRSKDGFSFLSENPNQGGVPYGVYSMGDIGSFNVPEQLAPRFHGNGVSLTLGLPHSENLPLSGTQHGMGYLPLHNMQLGKFETGANGTEINTPHSSYSSNRFDNNIDVQNRKRFDAHNLLPDFVS* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01523 766 Coils Coil 324 344 - -
Pte1g01523 766 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 180 523 - -
Pte1g01523 766 ProSiteProfiles 'Homeobox' domain profile. 437 500 IPR001356 GO:0003677
Pte1g01523 766 Pfam Homeobox KN domain 457 496 IPR008422 GO:0003677|GO:0006355
Pte1g01523 766 MobiDBLite consensus disorder prediction 507 542 - -
Pte1g01523 766 Gene3D - 443 523 - -
Pte1g01523 766 CDD homeodomain 440 501 IPR001356 GO:0003677
Pte1g01523 766 SMART HOX_1 440 504 IPR001356 GO:0003677
Pte1g01523 766 SMART prehox3 252 392 IPR006563 -
Pte1g01523 766 FunFam BEL1-like homeodomain protein 9 443 505 - -
Pte1g01523 766 Pfam Associated with HOX 258 390 IPR006563 -
Pte1g01523 766 SUPERFAMILY Homeodomain-like 441 507 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01523 Pte-Chr1 36646458 36651082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01523 34 767 Homeobox Transcription Factor Family AT2G35940 40.967 7.88e-129 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pte1g01523 POX 2.2e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01523 - - jre:108988270 711.449