Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01516 ATGAAAAGTGAATTACTAAGGGGAAGTACGGCTTCCATCTCAGTCCAAAACCCTAGTCTCTTCAACCCAAACCACAACCCTCTTTCCGGCGCTCTAAACGGCTGTCTTGGGAGCCTTGACGGGGCATGTATCGAAAAACTTTTACTGCACTGTGCTAGTGCTTTAGAAAGCAATGATGTGACTTTGGCTCAACAAGTTATGTGGGTGCTCAATAACGTTGCTTCCTCAGTTGGGGACACTAACCAAAGGCTCACTTCATGGTTTTTGAGGGCACTTATATCTAGGGCTTCAAGGGTCTGTCCAACGCCTATGAATTTCAACGGAAGCAGCATCCAAAGGAGGTTGATGTCTGTGACTGAGTTAGCAGGGTACGTTGATTTAATCCCTTGGCATCGTTTTGGTTTTAGTGCATCAAATAATGCCATCTTTAAAGCAATTCAAGGGTTCTCCAGAGTCCATATTTTAGATTTTAGTATCACTCATTGTATGCAGTGGCCTACTCTTATCGATGCCTTGGCTAAAAGAGATGAAGGGCCTCCTTCACTCAGAATAACTGTGCCCTCTTGCAGGCCACCAGTCCCTCCCTTGGTTAATGTATCTAGTGAAGAAGTCGGTCTCCGTTTGAGAAATTTTGCCAAGTTTAAGGAAGTACCTTTCGAATTCAACGTGATAGGAAATCCTCCTTCATCACCTTCTTCTCCTTTGGTCAAAGAGTTTGACTTCGAATCTCTATTAGCTCATTTGAACCCTTCAGCTCTAAACCTTAGGGACGACGAAGCTTTAGTGATAAATTGCCAAAGTTGGCTGCGTTATCTCTCTGACGATCAGCGAGACATTAGTTGTGGTCAAGACACTTCAATTCGAGACACTTTTCTTAGCATAATTAGAAGTCTTAACCCTCGCATAGTTCTGATAGTCGATGAAGATTGTGACCTGCGTGCGTCAAGTTTGACATCAAGAATCACAACTTGTTTCAATTATCTGTGGATTCCTTTTGATGCCCTCGAAACTTTCTTGCCTAAAGACAGTTGTCAGAGATTGGAATACGAATCTGACATAGGACACAAAATAGAAAACATAATTAGCTTTGAAGGGTTGCAAAGGATAGAAAGATTAGAGTCTGGACTAAAATTATCACTGAGAATGAAAAATGCAGGGTTCCTTAGCGTTCCATTTTGTGAAGAGACAGTGAGAGAAGTGAAGGCTTTGCTTGATGAACATGCCAGTGGATGGGGGATGAAGAGAGAAGAAGAGACATTAGTACTCACATGGAAGGGCCACAACTCGATGTTTGCAACAGCTTGGGTCCCCAGTAGCATGGAGGATTAA 1329 0.4289 MKSELLRGSTASISVQNPSLFNPNHNPLSGALNGCLGSLDGACIEKLLLHCASALESNDVTLAQQVMWVLNNVASSVGDTNQRLTSWFLRALISRASRVCPTPMNFNGSSIQRRLMSVTELAGYVDLIPWHRFGFSASNNAIFKAIQGFSRVHILDFSITHCMQWPTLIDALAKRDEGPPSLRITVPSCRPPVPPLVNVSSEEVGLRLRNFAKFKEVPFEFNVIGNPPSSPSSPLVKEFDFESLLAHLNPSALNLRDDEALVINCQSWLRYLSDDQRDISCGQDTSIRDTFLSIIRSLNPRIVLIVDEDCDLRASSLTSRITTCFNYLWIPFDALETFLPKDSCQRLEYESDIGHKIENIISFEGLQRIERLESGLKLSLRMKNAGFLSVPFCEETVREVKALLDEHASGWGMKREEETLVLTWKGHNSMFATAWVPSSMED* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01516 442 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 44 431 IPR005202 -
Pte1g01516 442 Pfam GRAS domain family 45 435 IPR005202 -
Pte1g01516 442 ProSiteProfiles GRAS family profile. 35 436 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01516 Pte-Chr1 36559606 36561203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01516 20 437 GRAS Transcription Factor Family AT3G49950 47.418 1.25e-126 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte1g01516 GRAS 1.1e-86 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01516 - - qsa:O6P43_000622 707.597