Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01513 ATGCGTGAATCAGAGAAAGTCCAAATTAGGAGGGATGGATCCAAATCCCTGGCTGAACGGCTTAGGAAATGGAAAGAGTATAATGCTCAACTTGATTCATGTAATGAGGAGGACAAGCCAACTCGAAAACTGCCTGCGAAAGGATCGAAAAAAGGATGTATGAAAGGGAAAGGAGGGCCTGAGAACTCGCGATGTAACTACAGAGGTGTTAGGCAAAGGACATGGGGCAAATGGGTTGCTGAAATTCGAGAACCTAATAGGGGGAATAGGCTTTGGTTAGGTACCTTTCCTACTGCCATTGCAGCTGCTCTTGCGTACGATGAAGCAGCGAGAGCCATGTACGGGTCTTGTGCTCGCCTAAACTTTCCCAACATATCAATCTCCACGTTCACAAATGACCATTCAAATGATTCTCCAGTTGCAGAATCATCTGGTTCTGCCGGCACATCTGTGTCGAATCAATCTGGTGTCTTTGCAGGGGAAGGGGAGATGGACGAACCTGTTTCCCCTAGTGTGAAGCATGGAGATGGAGAAGGTGAGTCAGGAGTTGATTCTTCCTCGCCCGTTTCATGA 573 0.4747 MRESEKVQIRRDGSKSLAERLRKWKEYNAQLDSCNEEDKPTRKLPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPTAIAAALAYDEAARAMYGSCARLNFPNISISTFTNDHSNDSPVAESSGSAGTSVSNQSGVFAGEGEMDEPVSPSVKHGDGEGESGVDSSSPVS* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01513 190 ProSiteProfiles AP2/ERF domain profile. 66 123 IPR001471 GO:0003700|GO:0006355
Pte1g01513 190 MobiDBLite consensus disorder prediction 135 157 - -
Pte1g01513 190 SUPERFAMILY DNA-binding domain 66 123 IPR016177 GO:0003677
Pte1g01513 190 MobiDBLite consensus disorder prediction 35 65 - -
Pte1g01513 190 MobiDBLite consensus disorder prediction 135 190 - -
Pte1g01513 190 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 2 154 - -
Pte1g01513 190 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Pte1g01513 190 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Pte1g01513 190 Gene3D AP2/ERF domain 66 125 IPR036955 GO:0003700|GO:0006355
Pte1g01513 190 CDD AP2 65 124 IPR001471 GO:0003700|GO:0006355
Pte1g01513 190 SMART rav1_2 66 129 IPR001471 GO:0003700|GO:0006355
Pte1g01513 190 FunFam Ethylene-responsive transcription factor 2 65 124 - -
Pte1g01513 190 Pfam AP2 domain 65 115 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01513 Pte-Chr1 36481530 36484965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01513 13 161 AP2-EREBP Transcription Factor Family AT2G40340 58.170 1.51e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte1g01513 AP2 2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01513 - - qlo:115955622 239.58