Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01510 ATGAACAACTGCGAGCTTTGCAAGGCACGAGCGACGACGTTCTGTGAATCGGACCAGGCTAGCTTGTGCTGGGACTGTGACGCCAAGGTTCATGGTGCCAACTTTCTGGTAGCTAGGCACTCTAGAACTCTTCTGTGCCGGTCTTGTCAATCTCCTACGCCTTGGAGAGCCTCCGGTTCAAAGCTGGGAAACACTTTCTCTTTCTGTGAGACTTGTAATGATAGTGTGAAAGGAGGAGAAAGCGAGACGGGCAATGATGACGATGTAGTAACAGATGATGACGTCAACGATGAAGATAGTGTCGACTCCGATGCACGCCGTAACGATGTTTTGACAGATAAGGACGATTACGATGACGACGTCGATGCTGATGAAGAAGATGGCGATAATCAGGTCGTTCCTTTTTCAATCACTTCGCCACCTCCGCTCCCAGCGAGCTCATCCAGCGGCGATGAATCTGTCTACAGATCAAGTAACAATGATGGAGATTTCTGTGAATCTGCGTCGTTTTTTTCGTTGAAGATAATGCGTGAAAAGGCATCAGATCTCCTTCTTCAGGACGACGATAGAAGTCTCTCATCGAGGTACGGTTCAGAGTTGATGAACGAGGTGGCTGTTGAGTCACGCACCGGTGGCGAAGCCACGTGCCATGAATCATGGAGGCCGTTGAAAGTTCGACGAACTGGACCGGGTCGGACAAGTTTCAAATATCCGTATGGGAACAAAATGGTTGAAAACCTTAAGGAAGGAGAGAGAAACTGTGACAATCTGGACGAAGCTGTTTAA 786 0.486 MNNCELCKARATTFCESDQASLCWDCDAKVHGANFLVARHSRTLLCRSCQSPTPWRASGSKLGNTFSFCETCNDSVKGGESETGNDDDVVTDDDVNDEDSVDSDARRNDVLTDKDDYDDDVDADEEDGDNQVVPFSITSPPPLPASSSSGDESVYRSSNNDGDFCESASFFSLKIMREKASDLLLQDDDRSLSSRYGSELMNEVAVESRTGGEATCHESWRPLKVRRTGPGRTSFKYPYGNKMVENLKEGERNCDNLDEAV* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01510 261 MobiDBLite consensus disorder prediction 76 158 - -
Pte1g01510 261 MobiDBLite consensus disorder prediction 132 158 - -
Pte1g01510 261 CDD Bbox1_BBX-like 4 45 - -
Pte1g01510 261 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 193 - -
Pte1g01510 261 MobiDBLite consensus disorder prediction 85 99 - -
Pte1g01510 261 MobiDBLite consensus disorder prediction 115 129 - -
Pte1g01510 261 SMART bboxneu5 1 45 IPR000315 GO:0008270
Pte1g01510 261 MobiDBLite consensus disorder prediction 100 114 - -
Pte1g01510 261 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Pte1g01510 261 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01510 Pte-Chr1 36464582 36466220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01510 4 94 C2C2-CO-like Transcription Factor Family AT5G54470 54.082 1.27e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte1g01510 zf-B_box 2.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01510 - - twl:120006999 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01510 1 36464582 36466220 Pte1g01510 1 36464582 36466220 RCT