Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01493 ATGGCCTTCCTCAGCAGAGCTTCAAGATTTGTCCAGGGATCATCTGCTTACTCCAAGCTATTCATACTCTGCACACTCAGTGGTGGAGGTGTTGTGGCCTACTCAGAATCAAAATCCGATGTTGGAGCTCCGCCAATCGGGCATAAGAGAAAGAGGGTGGTTGTTCTTGGAACAGGATGGGCTGCTGTCAGTTTCCTTAAGGATCTGGATGCTTCATTATATGATGTCCAGGTTGTCTCACCTCGCAATTACTTTGCATTTACTCCCTTATTGCCCAGTGTCACTTGTGGAACAGTTGAAGCACGGAGCATTATCGAGCCAATCAGAAACATTGTAAAGAAGAGAAAAGGCGAATTTATATTTTATGAAGCTGAATGTGTGAAGATAGATTCTACAGAGAAAAAAGTCTTTTGCGAGTGTAACATTGGCTCCAATTTAGCTGGAAGTGGTGAGTTCTCTTTGGAATATGACCTACTGGTGGTAGCAGTAGGAGCACAAGTAAATACTTTTGGTACCCCTGGAGTCAAAGAGAATTGCCATTTCCTGAAGGAAGTAGAAGATGCTCAGAAGATTAGAACGAGTGTAATTGATTGTTTTGAAAAGGCTGTTCTACCTAGTCTAAGTGAAGAAGAGAAGCGGAAAAATCTGCACTTTGTAATTGTTGGAGGGGGTCCAACAGGCGTGGAATTTGCTGCTGAGTTGCATGATTTCGTCCAGGAAGATCTGGTCAACTTATACCCTTCAGTTAAAGATCTGGTGAAAATAACACTTATCCAATCAGGAGATCACATATTGAACATGTTTGATGAAAGAATCAGTTCCTTTGCCGAGACAAAATTTAGTAGAGATGGCATAGATGTGCAAACGGGACAACGAGTTGTCAATGTTTCTGATAAGGAAATAATTGTGAAGGCAAAATCAAAGGGAGAGGATTGTGCTGTTCCTCATGGATTAGTTGTGTGGTCGACTGGAGTTGGTACTCGTCCAGTTGTAAGGAACTTCATGGATCAGATAGGCCAGACTAAAAGGCGAGTGCTAGCAACTGATGAATGGTTAAGAGTGAAGGGCTGTGAATCTATCTATGCCATTGGTGATTGTTCCACTATAGATCAACGTAAAATCATGGATGATATCTCGGCCATCTTTAAAGCTGCAGACAAAGACAACTCCGGTTACTTATCCACTTCAGAATTTCAAGATGTGATGGATGACATCCTTATAAGATACCCCCAGGTCGAGATTTATCTTAGGAGCAAACATCTAAAAGATCTAACTGAACTGTTAAAAGATCAGGATAGAAATGATGAAGAGGAAATAGACATTGAAAGGTTCAAGTTAGCTCTCTCTCACGCAGATTCGGAGATGAAGAGTTTGCCAGCAACCGCACAGGTTGCAGCTCAACAAGGCACCTATCTAGCCAAGTGCTTCAATCGCTGGGAGCATTGTGAAGCAAATCCTGAAGGTCCAAAGCGTTTTAGAGGTTCTGGGCATCACCAGTTTCGTCCCTTCAGGTATAAACATTTTGGACAATTTGCTCCTTTGGGTGGTGAGCAGGCAGCAGCAGAACTGCCTGGAGATTGGGTTTCCATGGGTCACAGCACACAGTGGCTCTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGCACGAGAATGTTGGTGGTATCTGATTGGACAAGGAGATTTATTTTTGGTAGAGATTCAAGTCGAATTTGA 1719 0.4293 MAFLSRASRFVQGSSAYSKLFILCTLSGGGVVAYSESKSDVGAPPIGHKRKRVVVLGTGWAAVSFLKDLDASLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIIEPIRNIVKKRKGEFIFYEAECVKIDSTEKKVFCECNIGSNLAGSGEFSLEYDLLVVAVGAQVNTFGTPGVKENCHFLKEVEDAQKIRTSVIDCFEKAVLPSLSEEEKRKNLHFVIVGGGPTGVEFAAELHDFVQEDLVNLYPSVKDLVKITLIQSGDHILNMFDERISSFAETKFSRDGIDVQTGQRVVNVSDKEIIVKAKSKGEDCAVPHGLVVWSTGVGTRPVVRNFMDQIGQTKRRVLATDEWLRVKGCESIYAIGDCSTIDQRKIMDDISAIFKAADKDNSGYLSTSEFQDVMDDILIRYPQVEIYLRSKHLKDLTELLKDQDRNDEEEIDIERFKLALSHADSEMKSLPATAQVAAQQGTYLAKCFNRWEHCEANPEGPKRFRGSGHHQFRPFRYKHFGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRMLVVSDWTRRFIFGRDSSRI* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01493 572 PANTHER NADH DEHYDROGENASE 49 572 IPR045024 GO:0003954|GO:0006116
Pte1g01493 572 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 419 571 - -
Pte1g01493 572 ProSiteProfiles EF-hand calcium-binding domain profile. 373 408 IPR002048 GO:0005509
Pte1g01493 572 Pfam Pyridine nucleotide-disulphide oxidoreductase 51 375 IPR023753 GO:0016491
Pte1g01493 572 Pfam EF hand 378 403 IPR002048 GO:0005509
Pte1g01493 572 SUPERFAMILY FAD/NAD(P)-binding domain 50 269 IPR036188 -
Pte1g01493 572 ProSitePatterns EF-hand calcium-binding domain. 386 398 IPR018247 -
Pte1g01493 572 SUPERFAMILY FAD/NAD(P)-binding domain 215 370 IPR036188 -
Pte1g01493 572 SMART efh_1 377 405 IPR002048 GO:0005509
Pte1g01493 572 SUPERFAMILY EF-hand 370 458 IPR011992 -
Pte1g01493 572 Gene3D - 45 392 - -
Pte1g01493 572 Gene3D - 418 571 - -
Pte1g01493 572 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 45 402 - -
Pte1g01493 572 PRINTS FAD-dependent pyridine nucleotide reductase signature 156 174 - -
Pte1g01493 572 PRINTS FAD-dependent pyridine nucleotide reductase signature 217 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01493 Pte-Chr1 36360847 36366380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01493 1 573 Chloroplast and Mitochondria Gene Families AT4G21490 65.172 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01493 K03885 - qsa:O6P43_000666 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01493 1 36360847 36366380 Pte1g01493 1 36360847 36366380 RCT