Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01477 ATGGGGGGTTGTGTCTCAACTAGTAGCCAGAGTACTTGTAGTAGCAGGAGCACTGGAGAGACTCTCACTCCATCTTGCTTGGAAATTGCATTCTGTGGGCAAAAGAAAACTAGAAAAACATTTTCAGATCATATTATTTCACTGCAGCATTTATCATCCATTCCCAATCGGCTTTTTACAAATGGAAAGACAAGAGCTTCCTGCATATTCACACAGCAAGGTGGCAAGGGCATCAACCAGGATGCTATGATTGTGTGGGAAGATTTCGTGTCCGAGGATGTTATCTTCTGTGGCGTCTTTGATGGTCACGGTCCACATGGCCACCTTGTTGCACGCAAGGTGAGGGATGAGCTGCCTGTTAAGCTACTTTCATTTTTAGACACTTGTCAGTCAAGGCAAAATGGTTTGGGTACAACTTGCTTCAAGGAGAAGCAGAAGAGGCATGATGGTGGGGAGCCTGAGAACGATTGTTCAGCTGAGGAAAATTTAAACACTACCTGGAGAGAAGCTTTCTTAAAGTCATACAAGGCTATGGATAAAGATCTGAGATCACTTCCTAACTTGGACTGCTTCTGTAGTGGTAGCACTGCTGTAACTGTAGTGAAGCAGGGATCAAATTTATTTGTGGGAAACATTGGGGATTCACGAGCAATCTTGGGATCTAAGGACAATAATAACTCAGTGGTGGCAATCCAGTTGACTGTTGATTTAAAGCCCGATTTACCAAGGGAGGCAGAAAGAATAAAGCAGTGCAAAGGAAGAGTTTTTGCGTTGCAAGATGAACCTGAAGTGCCCAGGGTATGGTTGCCTTTTGATGATGCACCTGGATTAGCAATGGCTCGAGCATTTGGAGATTTTTGTCTAAAGGAGTATGGGGTGATTTCAATTCCCGACTTCTCTCACCGGACTCTTACAGATAGAGATCAGTTCATAGTTCTTGCCTCAGATGGAGTTTGGGATGTCTTGAGCAATGAGAAAGTGGTTGAGATAGTATCTTCAGCTCCATCCAGGACATCAGTTGCAAGGACTCTTGTGGACTCAGCAACTAATGAATGGAAAGTCAAATACCCGACATCAAAGATGGATGACTGCGTTGTGATTTGTTTATTTTTGGATGGAAAAATGGATGCAGAATCTGATAACGAAGAACAAAGCTTTTCATATGCTACCATCCAAAATAACCATTCAGGCACTGCAATTGAAACAGATGATAGGCAGAAATCTGAGCCAACTTTGCATAGAAACTTCACTGTAAGACCCTTGGAAGATAAGAATACTTATGCACAACTACCTATTGATGGGGATGAGACATTATCAACTGAAGATCAAAACTGGTCTGGGTTGGATGGTGTCACTCGGGTGAACTCACTGGTTCAACTTCCTAGATTTTCTGATGAACAGCGTAACTCCTGA 1413 0.4296 MGGCVSTSSQSTCSSRSTGETLTPSCLEIAFCGQKKTRKTFSDHIISLQHLSSIPNRLFTNGKTRASCIFTQQGGKGINQDAMIVWEDFVSEDVIFCGVFDGHGPHGHLVARKVRDELPVKLLSFLDTCQSRQNGLGTTCFKEKQKRHDGGEPENDCSAEENLNTTWREAFLKSYKAMDKDLRSLPNLDCFCSGSTAVTVVKQGSNLFVGNIGDSRAILGSKDNNNSVVAIQLTVDLKPDLPREAERIKQCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPDFSHRTLTDRDQFIVLASDGVWDVLSNEKVVEIVSSAPSRTSVARTLVDSATNEWKVKYPTSKMDDCVVICLFLDGKMDAESDNEEQSFSYATIQNNHSGTAIETDDRQKSEPTLHRNFTVRPLEDKNTYAQLPIDGDETLSTEDQNWSGLDGVTRVNSLVQLPRFSDEQRNS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01477 470 ProSiteProfiles PPM-type phosphatase domain profile. 66 371 IPR001932 -
Pte1g01477 470 PANTHER PROTEIN PHOSPHATASE 68 369 IPR015655 GO:0004722|GO:0006470
Pte1g01477 470 MobiDBLite consensus disorder prediction 1 20 - -
Pte1g01477 470 Pfam Protein phosphatase 2C 151 349 IPR001932 -
Pte1g01477 470 SUPERFAMILY PP2C-like 60 373 IPR036457 -
Pte1g01477 470 SMART PP2C_4 50 369 IPR001932 -
Pte1g01477 470 FunFam probable protein phosphatase 2C 52 57 374 - -
Pte1g01477 470 CDD PP2Cc 72 371 IPR001932 -
Pte1g01477 470 Gene3D - 56 373 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01477 Pte-Chr1 36229658 36231982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01477 1 467 PP2C-type Phosphatase Gene Family AT1G03590 66.387 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01477 - - qsa:O6P43_028780 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01477 1 36229658 36231982 Pte1g01477 1 36229658 36231982 RCT