Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01473 ATGGAAGTAGCTGTGAACATGGATGCCAAAGAAGAAGAGCATGCGCTGCTGCTTGGCCAAGCTGACGTGTGGAAGTTCATGTTTAGCTTTGCAGATTCAATGGCCTTGAAATGCGTTGTGGAGTTAGGCATAGCTGACATAATCGACAGGCACGGTGGCCCTATAACCTTGAAGCAAATCATGGCTGGTATTTCTGATGCACCCTCTCCTGATATCACATACCTTGCACGTATCATGAGATTTCTTGTCCGCAAAAAAATATTCACTGCAAATCAACCCCTTGACGGTGATGAAGAGTGTGAGACCCTGTACGGGTTGACCCACTCATCCAAATGGATATTGAGGGACTCAAAGGTGAGCTTAGCTCCCATGCTGCTGATGGAGAACCATCCATGGCTGCTGGCCCCATGGCATTGTTTCAGTCAATGCGTGAGAGAAGGCGGGGTGGCCTTCAAAAAGGCTCATGGCTGTGAAATTTGGGAGCTTGCTTCGGAGAATCCTGAGTTTAATGTGTTGTTCAATGAAGGGCTGGCTTCGACGTCCAGGATTGTGCATAGGGCAGTGATCTCAGGATACAAAGATGGGTTCGTCAGTATTGGAGCATTGGTGGATGTGGGCGGTGGGACAGGGTCCATGATCCACGAGATCGTGAAATCATATCCGCACATAAGAGGTATCAACTTTGATTTGCCTCATGTGATTAGTACCGCCCCTAACTACGACGGAGTGACCCACGTCGGAGGAGACATGTTTAAGGCCATTCCCAGCGCCGATGCTGTTCTCTTGAAGTGGGTGCTTCATGATTGGAGCGACGAAGATTGCATAAAGATTTTGACGAACTGCAAGAAGGCATTACCGGAAAAGAATGGGAAGCTGATGATAGTTGAGTGTGTTCTACAACCTGATGGAAGGGGGCCTTTTGATGACTCAAAGTTAGTGCTTGATTTGCTTATGATTGCTCATACTGTGGGAAAGGAGAGGACAGAGGCAGAGTGGAAGAAGCTGTTGGGACAGGCTGGCTTTCCTCGTTACAGAATACTCAATATTCAGTCTCTCCCATCCATCATTGAAGCCTACCCAATATGA 1086 0.4788 MEVAVNMDAKEEEHALLLGQADVWKFMFSFADSMALKCVVELGIADIIDRHGGPITLKQIMAGISDAPSPDITYLARIMRFLVRKKIFTANQPLDGDEECETLYGLTHSSKWILRDSKVSLAPMLLMENHPWLLAPWHCFSQCVREGGVAFKKAHGCEIWELASENPEFNVLFNEGLASTSRIVHRAVISGYKDGFVSIGALVDVGGGTGSMIHEIVKSYPHIRGINFDLPHVISTAPNYDGVTHVGGDMFKAIPSADAVLLKWVLHDWSDEDCIKILTNCKKALPEKNGKLMIVECVLQPDGRGPFDDSKLVLDLLMIAHTVGKERTEAEWKKLLGQAGFPRYRILNIQSLPSIIEAYPI* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01473 361 PANTHER O-METHYLTRANSFERASE 23 343 IPR016461 GO:0008168
Pte1g01473 361 Gene3D - 8 113 IPR036388 -
Pte1g01473 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 359 IPR029063 -
Pte1g01473 361 SUPERFAMILY "Winged helix" DNA-binding domain 17 116 IPR036390 -
Pte1g01473 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Pte1g01473 361 Gene3D Vaccinia Virus protein VP39 115 361 IPR029063 -
Pte1g01473 361 FunFam O-methyltransferase family protein 115 359 - -
Pte1g01473 361 Pfam Dimerisation domain 34 83 IPR012967 GO:0046983
Pte1g01473 361 Pfam O-methyltransferase domain 137 341 IPR001077 GO:0008171
Pte1g01473 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 360 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01473 Pte-Chr1 36200123 36202277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01473 34 347 Monolignol Biosynthesis Gene Families AT5G54160 38.365 1.84e-76 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01473 K22588 - qsu:111998567 526.168