Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01452 ATGGGTTGCATTTGCTCTAAGGTCTCAGCTGTTGAGGATGGCCGGGAATATTTGCCAAATAAATTGCCATCATCAACTAAAGGGGCGCCAGAGAGTTCTGGTGAAAACAACGAGAAAGCTGTGGAAAAAGATTATTTGGATGGCAATCATTCCAGAGTGTCTTTGGTTGACAACAAAGAGCATGGTTCATATCACGTGCCCTATCATGGTCAGATCATCAGTGATAAGAAGAAAGAAGAGAGTCCTGAGGTAACTCCTCTTAAATTAAATCATCCAAGCTTTGGAAGAGTCCCAAAGGCTGCAATTGGAGACCAGGTAGCCGCTGGATGGCCAAATTGGCTTTCTGCAGTTGCAGGTGAAGCTATCTCTGGATGGCTACCACGATGCGCAAACACATTTGAGAAGTTAGATAAAATTGGCCAAGGAACCTATAGTAGTGTTTATAGGGCACGTGATATGACATACCAAAAAGTCGTCGCTTTGAAGAAAGTACGGTTTGATAATCTTGACCCTGAGAGTGTGAAATTTATGGCAAGGGAAATCCTAGTCCTGCGCAGGCTACAACATCCAAATGTTATAAAGTTGGAAGGATTGATAACTTCAAAAATGTCTCGTAGCTTGTACCTTGTCTTTGAGTACATGGAACATGATCTTACAGGACTTGTATCAAGACCTGGCATTAAGTTTTCTGAACCGCAGGTCAAATGCTATATGAAGCAACTTCTTAGTGGACTTGATTATTGTCATAGTCATGGAGTCTTGCACCGTGACATAAAGGGGTCCAATATCCTTATTGATAATAGTGGAATCTTAAAGATTGCAGACTTTGGTTTGGCAAGCTTGTTTGATCCCAACCACAATGGGCCATTGACAAATCGTGTGGTTACTCTCTGGTACAGACCACCCGAACTTTTACTGGGAGCCTCTCACTATGGAGTTGCAGTGGATTTGTGGAGTGCTGGTTGCATACTAGGAGAATTGTACACTGGCAAGCCTATATTGCCTGGAAAAACAGAGGTTGAGCAATTACATAAGATCTTCAAGCTGTGTGGTTCACCTTCCGAGGATTATTGGGGGAAATTGCGTTTACCAAATGCAGCTATATTCAAGCCTCCACACTCTTATAGACGTTGTCTTGCTGACACGTTCAAGCAAATTCCAGCTGCTGCTGTAAGGCTAATTGAGACCTTACTCTCCCTAGACCCGGCATGTCGAGGGACAGCAGCTACTGCTCTCAGAAGTGAGTTCTTTACAACGGAACCTCTTGCTTGTGATCCTTCAAGTTTACCAGCATATCCTCCCAGTAAAGAGATCGACGCCAAAATGCTGGATGAAGTCTGCAGAAGGCAAGGAGTCAGTGGCCCTAGGGAGCGTAAATGTGGCTTGAGAATTCAACCAGACAAAGAGCTTCCAGCAATTCCTGTTGCAAAAGTTAATGCAGGGCAACTCCCATCGATGCAGAGTACTCATGCCCATTTGAGTACGAAGAGCCGAAGTCAGTTGATCAATATGTGCAGGAATGAATCTCTTTCTGGTTTTCTGGTTGGTCCACATAAACAGTCAGTTCACACAAATGAAATCAAGAGAGACCGCCTGGATTATGTCTATACGAAGCCTTCATTTTCAGGTCCATTAGCACATAGTGCTGGATGGGCAAATGCTGATAAGGAAGTTGATGTCCTGTCCATGTATCATCCTAACAAAGTCAAATTGCCAAACCGATCAGGTTTCGTGGCAAGTAAGATGCAGTGGGGTGAAGACAAGACAGAAAAAGTAGGTACTGTACAGAAAGAAAAAACACTTCCAAATGGAAGATGTATGGGATATCATGATGGATCACAATCAAGACGGGGGCATGATCCAAGGTATCAAACTCAGAGGTTTGCTGAATTCCATCATAATGAAGATGGAGGATTCCACACCAAAGATGCAAACCGGGAAATGTATGGGTCCAAGGGAAACAAGATATATGTTTCTGGTCCATTATTGGTCTCATCCAACAATGTGGATCAGATGCTTAAAGATCATGACCAGAGAATACAAGAATTTTCACGACGAACACGACTTGACAAGACAAGAGCCGATAGAGTTTACATGCAGCGTATGTAG 2109 0.4339 MGCICSKVSAVEDGREYLPNKLPSSTKGAPESSGENNEKAVEKDYLDGNHSRVSLVDNKEHGSYHVPYHGQIISDKKKEESPEVTPLKLNHPSFGRVPKAAIGDQVAAGWPNWLSAVAGEAISGWLPRCANTFEKLDKIGQGTYSSVYRARDMTYQKVVALKKVRFDNLDPESVKFMAREILVLRRLQHPNVIKLEGLITSKMSRSLYLVFEYMEHDLTGLVSRPGIKFSEPQVKCYMKQLLSGLDYCHSHGVLHRDIKGSNILIDNSGILKIADFGLASLFDPNHNGPLTNRVVTLWYRPPELLLGASHYGVAVDLWSAGCILGELYTGKPILPGKTEVEQLHKIFKLCGSPSEDYWGKLRLPNAAIFKPPHSYRRCLADTFKQIPAAAVRLIETLLSLDPACRGTAATALRSEFFTTEPLACDPSSLPAYPPSKEIDAKMLDEVCRRQGVSGPRERKCGLRIQPDKELPAIPVAKVNAGQLPSMQSTHAHLSTKSRSQLINMCRNESLSGFLVGPHKQSVHTNEIKRDRLDYVYTKPSFSGPLAHSAGWANADKEVDVLSMYHPNKVKLPNRSGFVASKMQWGEDKTEKVGTVQKEKTLPNGRCMGYHDGSQSRRGHDPRYQTQRFAEFHHNEDGGFHTKDANREMYGSKGNKIYVSGPLLVSSNNVDQMLKDHDQRIQEFSRRTRLDKTRADRVYMQRM* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01452 702 ProSitePatterns Protein kinases ATP-binding region signature. 139 162 IPR017441 GO:0005524
Pte1g01452 702 Gene3D Transferase(Phosphotransferase) domain 1 216 452 - -
Pte1g01452 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Pte1g01452 702 SMART serkin_6 133 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01452 702 PANTHER CELL DIVISION PROTEIN KINASE 131 422 - -
Pte1g01452 702 FunFam probable serine/threonine-protein kinase At1g54610 120 215 - -
Pte1g01452 702 ProSiteProfiles Protein kinase domain profile. 133 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01452 702 MobiDBLite consensus disorder prediction 16 45 - -
Pte1g01452 702 Pfam Protein kinase domain 133 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01452 702 MobiDBLite consensus disorder prediction 601 620 - -
Pte1g01452 702 SUPERFAMILY Protein kinase-like (PK-like) 127 423 IPR011009 -
Pte1g01452 702 Gene3D Phosphorylase Kinase; domain 1 120 215 - -
Pte1g01452 702 FunFam probable serine/threonine-protein kinase At1g54610 216 457 - -
Pte1g01452 702 CDD STKc_CDK9_like 133 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01452 Pte-Chr1 36066027 36071484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01452 125 455 Core Cell Cycle Gene Families AT5G10270 51.130 2.11e-115 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte1g01452 Pkinase 9.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01452 - - qsa:O6P43_028820 837.41