Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01446 ATGGCTTCAGCTTCATCATCATCATCTTTCATTGCGGTTCTAGTCCTCGTTTTCCTTTATCTATCTTCTGTGTTTATGAATATCGATGCGAAATCGAGTAACTCAGCTACTCGACACCACTATCACCACCAACACCATGCCCGGTCTTCTTCGTCATCAAATCCAAGACTTCGTAAAGCTTTTCTTGCCTTCCAAGCATGGAAAAGAGTAATCTACTCCGATCCATTCAACTACACCAGCAATTGGGTTGGCCCTTCTGTTTGCAACTACAAAGGTGTGTTTTGTGCTGCAGCTGTAGATGACCCTACCATCAAAGTTGTCGCCGGTATCGACCTCAATTTCGGGGACATTGCGGGGTTCCTCCCCGATGAGTTAGGTCTGCTTTCAGACCTTGCACTCCTTCATCTCAGTAACAATCGCTTCTGCGGCATTGTCCCGACGACATTCGCCAATCTTACTGTTCTCTACGAGCTTGATCTTAGCAGCAACAGATTTGTAGGACCGTTTCCATACGTTGTGCTTTCTCTTCCTATGCTGAAATTTCTTGATCTTCGTTTTAATGAATTTGAGGGACCATTACCTCCTCAACTTTTCAACAGAAGTTTTGATGCAATATTTGTGAACAGCAACCGATTCACTAGTGGACTTCCGTCAAATTTAGGCCAAAGTTCTGCATCTGTTTTGGTATTTGCAAACAACAACTTTGGTGGATGTATCCCAGAAAGCATATTCAAATTTGCAGACACTTTAGAGGAGCTTGTATTGATTAACAACAGTTTATCAGGTTGTTTGCCGCAACAACTTGGGTTTCTCTATAAATTAAGGTTGTTGGATGTCAGCTTTAACAGCATAGTTGGTCCTATACCTTATAGTCTTGCAGGGTTATCGCACTTGGAACATCTAAACTTGGGACATAATATGATGACTGGTATAGTGCCAATGGGTGTGTGTGTTTTGCCAAACCTAAACAATTTTACTTTGTCTTACAACTTCTTTTGTGAGGAAGAGGGTATTTGCCAAAATTTGACATCAAACGGGATAGTATTTGATGATCGCAGAAATTGCTTGCCTGACAAGCCATTGCAGAGGAGTCAAAAGCAATGTGAGTCTGTCTTAGAACATCCAGTTGATTGCTTTGAGCACCCTTGTGCAGGATTCGGCATGGCTGGAGGTTCGGTTTCTATTTCTCTTGCTCCTACTCTAGCCCCAGCTGCAATGGCTCTTACTTCACCTGCTCTTGCCCCTGCAAACACATGA 1257 0.4296 MASASSSSSFIAVLVLVFLYLSSVFMNIDAKSSNSATRHHYHHQHHARSSSSSNPRLRKAFLAFQAWKRVIYSDPFNYTSNWVGPSVCNYKGVFCAAAVDDPTIKVVAGIDLNFGDIAGFLPDELGLLSDLALLHLSNNRFCGIVPTTFANLTVLYELDLSSNRFVGPFPYVVLSLPMLKFLDLRFNEFEGPLPPQLFNRSFDAIFVNSNRFTSGLPSNLGQSSASVLVFANNNFGGCIPESIFKFADTLEELVLINNSLSGCLPQQLGFLYKLRLLDVSFNSIVGPIPYSLAGLSHLEHLNLGHNMMTGIVPMGVCVLPNLNNFTLSYNFFCEEEGICQNLTSNGIVFDDRRNCLPDKPLQRSQKQCESVLEHPVDCFEHPCAGFGMAGGSVSISLAPTLAPAAMALTSPALAPANT* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01446 418 FunFam Leucine-rich repeat extensin-like protein 1 61 222 - -
Pte1g01446 418 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 246 335 - -
Pte1g01446 418 Gene3D Ribonuclease Inhibitor 224 345 IPR032675 -
Pte1g01446 418 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 17 389 - -
Pte1g01446 418 Pfam Leucine rich repeat 131 188 IPR001611 GO:0005515
Pte1g01446 418 Pfam Leucine rich repeat 273 330 IPR001611 GO:0005515
Pte1g01446 418 Gene3D Ribonuclease Inhibitor 58 223 IPR032675 -
Pte1g01446 418 SUPERFAMILY L domain-like 63 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01446 Pte-Chr1 36038262 36039871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01446 53 384 Leucine-rich Repeat extension Gene Families AT3G24480 55.556 8.44e-133 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01446 - - qsa:O6P43_000748 577.4