Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01442 ATGAAACGCTTCGTATATATCAACGACGGCAAATCTTCACGCGAGGTTTATTGCGACAATCGCATATCAAACCGAAAGTATACTATATTGAACTTTCTTCCCAAAAATCTATGGGAACAATTCAGCCGTTTCATGAACCAGTACTTTCTGCTAATTGCCTGCCTCCAACTCTGGCCACTCATTACTCCAGTCAATCCTGCTAGTACATGGGGTCCTCTTATTTTTATTTTTGCAGTGTCTGCAACAAAAGAGGCTTGGGATGATTATAATCGGTATCTTTCAGACAAGAAAGCGAATGAGAAGGAAGTTTGGGTCGTGAGGGACAGCACAAAAAAACTTATTCGAGCACAGGACATTCATGTGGGCAATATAGTATGGCTTCGGGAAAATGATGAAGTACCTTGTGACCTCGTTCTGATTGGCACATCTGATCCTCAGGGACTTTGCTATGTTGAGACTTCTGCTCTTGATGGTGAGACTGACCTAAAGACAAGGATTATTCCTACTTCTTGCATGGGGATAGAGATAGATTTATTGCACAAAATCAAGGGTGTGATTGAATGCCCTAATCCAGATAAAGACATTAGAAGATTTGATGCTAGTCTGCGGTTGTTCCCTCCATTTATTGATAATGATGTGTACCCTTTAACCATAAAAAATACAATCCTTCAGTCCTGTTACTTACGGAATACAGACTGGGTTTGTGGAGTGGCTGTATACACAGGCAACGAGACAAAGCTCGGTATGAGTAGAGGTATTCCTGAACCAAAGCTTACTGCTATGGATGCTATGATTGACAAGTTAACTGGAGCCATATTTGTCTTCCAAATTGTTGTTGTAATGGTTCTTGGGATAGCGGGGAACGTTTGGAAGGATACAGAGGCAAAGAAGCTATGGTATGTTCTTTATCCAAAGGAAGGACCGTGGTTTGAGATGTTGGTTATCCCTCTTCGGTTTGAGCTTCTTTGTTCCATAATGATTCCCATATCAATAAAGGTATCTCTGGACCTTGTGAAGAGCTTGTATGCGAAGTTTATTGATTGGGATAATCAGATGATTGACCATGAAACTGGCATTTCTTCCCATGCTACTAATACAGCAATAAGCGAAGATCTTGGACAAGTTGAGTACATTTTGACGGACAAAACTGGTACTCTAACTGAAAATAAGATGATTTTTAGAAGATGTTGTATTGGCGGTATCTTCTATGGAAGTGAGAATGGTGATGCGCTGAAAGATGCAGATCTCCTTGATGCTGTTTCTTGTGCCTCTCGAGATGTTATACGTTTTCTTACTATCATGGCAATATGTAACACAGTGATACCCATGCAAAGCAAGAATGGTGATGTTATATATAAGGCACAGTCTCAGGATGAGGATGCTCTTGTTCAAGCAGCTGCCAAGTTGCATATGGTTTTCTTCAACAAGAATGCTAATATTCTCGAGATCAAATTCAATAAGTTGATATTTCAATATGAAATTCTAGAAACTCTGGAATTCACATCAGATAGGAAAAGAATGTCAGTGGTTGTGAAGGACTGTAAAACTGGAAAGATTAATCTACTTTCAAAAGGGGCAGATGAAGCTATCCTTCCTTATGTTCGTACTGGACAACAAACAAGGACTTACATTGAAGCTGTGGAGCAATACTCACACTTGGGGCTGCGTACATTATGTTTAGCTTGGCGTGAACTAGACGAAGATGAATACCAGGACTGGTCATTGATATTTAAAGATGCCAGTAGCACTTTAGTTGATAGGGAGTGGAGAATGGCTGAGGTCTGTCAAAGATTAGAACATAACTTGGAGATTCTTGGAGTTACAGCAATTGAAGATTGCCTACAGGATGGAGTTCCAGAAACAATTGAAACTTTAAGGAAAGCTGGAATCAATTTTTGGATGCTGACTGGAGACAAGCAGAATACAGCTATACAGATTGCTCTTTCATGCAACTTTATTTCCCCTGAGCCAAAGGGTCAGCTTCTACTGATTGATGGTAAAACTGCTGATGAAGTTCATAGAGCCTTGGAGAGAGTTCTTCTCACAATGAGAATAACAACCTCAGAACCTAAGGATGTTGCATTTGTTGTTGATGGATGGGCTCTTGAGATTGCACTTAAGCACTACCGAAAATCTTTTACTGAACTTGCTATATTGTCACGGACTGCAATATGCTGTCGCGTCACACCTTCACAAAAAGCACAGCTTGTTGAGATATTGAAATCATGTGACTATCGAACTTTGGCTATTGGAGATGGAGGGAATGATGTTCGAATGATCCAACAAGCTGATATTGGTGTTGGAATAAGTGGAAGAGAAGGATTGCAGGCAGCAAGAGCAGCCGACTATAGCATCGGAAAATTCAGGTTTTTGAAAAGATTGATACTTGTCCACGGGCGGTACTCATACAACCGTACAGCATTCCTTTCTCAATATTCATTCTACAAGTCCTTGCTGATATGTTTCATCCAAATTTTTTTCTCTTTTATTTCAGGTGTCTCAGGAACTAGCCTCTTTAATTCTGTGAGCTTGATGGCTTACAATGTGTTCTACACCAGTGTACCAGTCTTAGTTAGTGTGCTCGACAAAGATCTTAGCGAAGAAACAGTAATGCAGCATCCACAGATTTTATTTTATTGCCAAGCAGGAAGGCTTTTAAATCCTAGCACATTTGCTGGATGGTTCGGTAGATCCCTTTTCCATGCAATTGTGGTGTTTGTAATAAGCATACATGCCTATGCATATGAAAAAAGTGAGATGGAGGAGATTTCCATGGTAGCGCTCTCTGGTTGCATATGGTTGCAAGCTTTTGTTGTGATACTAGAGACCAATTCCTTTACGATATTGCAACATGTGGCTATATGGGGAAATTTGGCAGCCTTCTACGTCATAAATTGGATCTTCAGTGCTATTCCATCATCGGGGATGTATACAATTATGTACCGGTTATGTGGGCAGCCCTCGTATTGGATAACTATAGTTCTTACAGTTGCAGCCGGGATGGGTCCAATAGTTGCTATCAAGTACTTCAGATATACATATAGACCGAGTAAAATCAACATACTTCAGCAGGCTGAACGTCTGGGTGGTCCAATATTGTCTCTGGGAAGTATTGAGCCCCAGCTAAGATCTACTGATAAGGAGATTGCTCCATTATCCATCACACAACCTAAAAGCAGAAATCCCGTGTATGAGCCTCTATTATTAGACTCTCCAAATTCCACCAGACGAACATCTGCAACCCCATTTGATTTTTTCCAGTCGCAATCGAGATTATCATACTCTGGCTACACCAGAAATTGCAAGGACAACTGA 3315 0.406 MKRFVYINDGKSSREVYCDNRISNRKYTILNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVRDSTKKLIRAQDIHVGNIVWLRENDEVPCDLVLIGTSDPQGLCYVETSALDGETDLKTRIIPTSCMGIEIDLLHKIKGVIECPNPDKDIRRFDASLRLFPPFIDNDVYPLTIKNTILQSCYLRNTDWVCGVAVYTGNETKLGMSRGIPEPKLTAMDAMIDKLTGAIFVFQIVVVMVLGIAGNVWKDTEAKKLWYVLYPKEGPWFEMLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDNQMIDHETGISSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCIGGIFYGSENGDALKDADLLDAVSCASRDVIRFLTIMAICNTVIPMQSKNGDVIYKAQSQDEDALVQAAAKLHMVFFNKNANILEIKFNKLIFQYEILETLEFTSDRKRMSVVVKDCKTGKINLLSKGADEAILPYVRTGQQTRTYIEAVEQYSHLGLRTLCLAWRELDEDEYQDWSLIFKDASSTLVDREWRMAEVCQRLEHNLEILGVTAIEDCLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLLIDGKTADEVHRALERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKSFTELAILSRTAICCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFNSVSLMAYNVFYTSVPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVVFVISIHAYAYEKSEMEEISMVALSGCIWLQAFVVILETNSFTILQHVAIWGNLAAFYVINWIFSAIPSSGMYTIMYRLCGQPSYWITIVLTVAAGMGPIVAIKYFRYTYRPSKINILQQAERLGGPILSLGSIEPQLRSTDKEIAPLSITQPKSRNPVYEPLLLDSPNSTRRTSATPFDFFQSQSRLSYSGYTRNCKDN* 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01442 1104 SUPERFAMILY Calcium ATPase, transduction domain A 100 248 IPR008250 -
Pte1g01442 1104 Pfam Phospholipid-translocating ATPase N-terminal 5 70 IPR032631 -
Pte1g01442 1104 Gene3D - 602 790 IPR023214 -
Pte1g01442 1104 FunFam Phospholipid-transporting ATPase 602 789 - -
Pte1g01442 1104 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 386 571 IPR023299 GO:0000166
Pte1g01442 1104 Gene3D - 75 251 - -
Pte1g01442 1104 ProSitePatterns E1-E2 ATPases phosphorylation site. 381 387 IPR018303 -
Pte1g01442 1104 FunFam Phospholipid-transporting ATPase 75 251 - -
Pte1g01442 1104 NCBIfam HAD-IC family P-type ATPase 716 834 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g01442 1104 Pfam haloacid dehalogenase-like hydrolase 646 768 - -
Pte1g01442 1104 Pfam Cation transport ATPase (P-type) 436 533 - -
Pte1g01442 1104 PRINTS P-type cation-transporting ATPase superfamily signature 379 393 - -
Pte1g01442 1104 PRINTS P-type cation-transporting ATPase superfamily signature 628 638 - -
Pte1g01442 1104 PRINTS P-type cation-transporting ATPase superfamily signature 152 166 - -
Pte1g01442 1104 PRINTS P-type cation-transporting ATPase superfamily signature 750 769 - -
Pte1g01442 1104 Pfam E1-E2 ATPase 99 292 - -
Pte1g01442 1104 NCBIfam phospholipid-translocating P-type ATPase 425 1023 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pte1g01442 1104 SFLD Haloacid Dehalogenase 363 801 - -
Pte1g01442 1104 SUPERFAMILY Calcium ATPase, transmembrane domain M 12 1016 IPR023298 -
Pte1g01442 1104 SUPERFAMILY HAD-like 374 805 IPR036412 -
Pte1g01442 1104 Gene3D - 432 578 IPR023299 GO:0000166
Pte1g01442 1104 FunFam Phospholipid-transporting ATPase 449 592 - -
Pte1g01442 1104 SFLD p-type atpase 363 801 IPR044492 -
Pte1g01442 1104 Pfam Phospholipid-translocating P-type ATPase C-terminal 778 1017 IPR032630 -
Pte1g01442 1104 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 1027 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01442 Pte-Chr1 35989493 36003625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01442 1 1105 Primary Pumps ATPases AT5G44240 84.206 0.0 1966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01442 K01530 - tcc:18608746 1972.21