Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01440 ATGCTGACCGCGGAAACCAAAATGGCTATCAACCATAATAAGCTTGGAGTGAAGAAAGAAAATAAAAACCACAACGGTCAAGAGATTCATTACAGAGGCGTGAGGAAGAGGCCATGGGGTCGATATGCAGCCGAAATCCGAGACCCGGGCAAGAAGAGTCGGGTCTGGTTGGGTACTTTTGACACCGCTGAGGAGGCTGCCAGAGCATACGACGCCGCAGCTAGGCAGTTTCGTGGTCCCAAAGCCAAGACTAACTTCCCTTCATCTGAGGACAACGTCAATCACAATCATCTGAGTCCCAGTAGTGAGATCCATAGCACTGTCGAGACGTCGAGCCGGGATGGGACGGAGCGTCAAATCACTCGCTGTCTCGATGAGGGTTCGAAGCAGTCGGCCGAAGCGGCACCGACTACTGTGGTGGATCGGTTCCCATTTCTTCAGATGCAACCGCGAAACATGGGGTATCGTGGGAGTGACGTGGGTGGTGCTACTGACAGTTATGTGGCGGCTCGTACCGTTTTCTTTCTTGATCCGGTTGGCAGACCAGATTTATTGAGCCAGCGTTGTTATCCTGTCCGATTTGAACCGGTTGGACAAGTTGAGTTTAGAGCCGGTTTTGTTGGTGGGTTCCACAGCGATTCAGATTCATCTTCAATCGGTGACTGTCATCCGCCAAAAAAGGAAATCAATCTGGATCTTCACCTTGCTCCACCGATGGTGGATGCCTAA 729 0.5144 MLTAETKMAINHNKLGVKKENKNHNGQEIHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAARQFRGPKAKTNFPSSEDNVNHNHLSPSSEIHSTVETSSRDGTERQITRCLDEGSKQSAEAAPTTVVDRFPFLQMQPRNMGYRGSDVGGATDSYVAARTVFFLDPVGRPDLLSQRCYPVRFEPVGQVEFRAGFVGGFHSDSDSSSIGDCHPPKKEINLDLHLAPPMVDA* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01440 242 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Pte1g01440 242 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Pte1g01440 242 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 21 133 - -
Pte1g01440 242 MobiDBLite consensus disorder prediction 82 109 - -
Pte1g01440 242 CDD AP2 30 89 IPR001471 GO:0003700|GO:0006355
Pte1g01440 242 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Pte1g01440 242 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Pte1g01440 242 FunFam Ethylene-responsive transcription factor 2 30 88 - -
Pte1g01440 242 SUPERFAMILY DNA-binding domain 30 88 IPR016177 GO:0003677
Pte1g01440 242 Gene3D AP2/ERF domain 30 88 IPR036955 GO:0003700|GO:0006355
Pte1g01440 242 MobiDBLite consensus disorder prediction 82 118 - -
Pte1g01440 242 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01440 Pte-Chr1 35970427 35972305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01440 27 243 AP2-EREBP Transcription Factor Family AT5G44210 45.249 3.00e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte1g01440 AP2 1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01440 K09286 - qsa:O6P43_000758 231.876