Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01431 ATGTTTCTCTGTTATCCGACCCCTTCTCTTTCTCTTTCCCAGGATGGACTATACCTTCTCCAAGTGAAGAGCCAACTCTCAGACCCAACTAACGCTCTCTCTTCTTGGAATCCTCGTGATGATACTCCATGCAATTGGTTCGGGATAACCTGTGATTCAACGACTAAGCGAGTCAAGTCGGTTAACCTCCCTAACTTACAGCTAGCTGGACCCTTCCCCATCTTCCTTTGCCGCTTGCCTTTTGTCGCTAACATCACTCTCCTCAATAACTCTATCAACTCTACACTCTCCTCCATGGATTTCTCCAATTGTGAAAGTCTCGAACACCTCGACCTCTCCCAGAATCTCCTTGTGGGTTCCCTCCCTGACTCTCTCTCCGATATCCCAAACCTCCGGTTGCTTAACTTGTCTGGTAACAATTTCTCCGGCGAGTTCCCTGCGAGTTTCGGTCGTTTCCAGAAACTCGAATATCTGTATCTCCATGAGAACCTTCTCAATGGGACTATACCTAGTTCTCTGGGTAACATATCAAGTTTGAAAGAACTTCACCTAGCTTATAACCCGTTCACTCCAAGTCCCATACCGAGTGAACTCGGTAACTTGACGAATCTTGAGTTTCTATGGTTAGCATACTGTAACCTTGTGGGTACAATTCCAACTAGTCTGGGTAAGCTCACTCGTCTGACGAACCTTGACTTGTCAATCAATGGACTCACTGGATCAATACCGAGCTCCATTGTTGAGCTGAAAAGCATAATTCAAATTGAGTTATATAACAATTCTATCTCTGGCACGTTGCCTGAGGGACTCTCGAATTTGACTAATTTGAGAAGATTCGATGCTTCCATAAACTCATTGACGGGGACAATCCCCAATGAGCTGTGCAGGTTGCCACTTGGGTCACTGAATTTGTATAATAATCACCTGGAAGGGTCTGTACCTGGGAGTATAGCACTTTCACCAAATTTATACGAGGTCAAGTTGTTCAACAACGAACTCAGTGGGCAATTACCCAGTGAACTTGGCAAGAACTCTAAGTTACAGAGCCTCGACGTTTCGTATAATCAGTTTTCCGGTGAAATTCCGAGGACTTTGTGTGAAAATGGGGAGTTGATAGATCTTATTCTGATATACAATAAGTTTTCCGGGAAAATTCCCCCGAGTCTGGGAAAATGTCAAAGCTTGAACAGAGTGCGCCTTAGAAACAACAAGCTTTCGGGGGATGTTCCTGAGGGATTTTGGGGCTTACCCCATCTATATTTACTTGACCTCGTTGGGAATTCTTTGTCTGGGGCGATTCCTCGTTCAATATATGGTGCAAACAATCTTTCAGGTTTGTTGATTTCAAATAATCAATTTTCAGGGTCTCTGCCAGAGGAAATTGGGTTGTTGGGTAATCTTATTGAATTTTCCGGTAGCAGAAATAAGCTGACAGGTTCAATTCCTCGGAACATGGTTAAGTTGAGCCAGCTTGGAAAGCTTGATTTGAGTTACAATGGACTTACTGGGGGGATCCCACCTGGAATTCATGGTTGGAAGAAACTCAATGTGCTTAATTTGGCAAATAACCAGCTTGATGGAGAAATTCCTAGTGAGATCGGCAGCTTGCAAGATCTTAATTTTCTTGACCTATCTAGAAATTACTTTTCTGGTGCGATTCCATCTGAATTGCAGAACTTGAAACTCAATTTGCTGAACCTATCAGACAATCAGCTTACGGGAGACATCCCTCAACTTTATGCTAATCAATATTATCGAAATAGTTTTGTAGGGAACCCAGGTTTATGTGGTAATCTCCCAAGACTCTGCTCAAATATCGCTGAAAGCAAAAGTAGAAAGTACGTGTGGATTTTCAGATCAATCATTGTGCTTGCATCCGTTGTTTTTGTCACTGGTTTAGCTTGGTTTTACATGAAATACCGTAAGTTCAAGAAGATGAAAGCAGGATATACCATGACAAAGTGGAAGTCATTCCACAGACTTGGTTTCAGTGAGTTTGAGGTTGTTAAATACCTTGATGAAGACAATGTCATTGGGGCTGGAGCTTCTGGGAAGGTCTACAAGGTGACACTAAGTAATGGTGAAGTAGTGGCCGTGAAGAAATTGTGGGCCTCAAATAAGAAGGAAAGCAGTAGTGAAGGGTTTGATAAGGACGAATTCGAAGTCGAAGTAGAAACACTGGGGAACATTAGGCATAAGAATATTGTGAGGCTATGGTGTTGCTACAAGAGTGGGGAAAGCAAGCTTCTAGTATATGAATACATGCCGAATGGGAGCCTAGGTGATTTGTTGCACAGTAGCAAAGGAAGGTTGTTAGATTGGAAGACAAGATATAGAATTGCTTTAGATGCAGCTGAAGGACTGTCTTATCTGCATCATGATTGCGTTCCACCAATAGTTCATAGAGATGTCAAATCTAATAACATATTGTTAGATGGAGAGTTTGGAGCCAAAGTTGCAGACTTTGGAGTTGCTAAAATTGTTAGAGGTGCCAACCAAGGCGCAGAATCGATGTCTGTGATTGCAGGATCTTGTGGCTATATTGCACCAGAATATGCATACACTTTACGTGTAAATGAGAAGAGCGATACTTATAGCTTTGGAGTAGTCATTCTGGAGTTAATAACAGGAAAGCGGCCTGTTGGTCCAGAGTATGGGGAAAAGGACTTGGTGAAATGGGTATGGTCAACTTTGGATCAGAAAGGTGTCGACCATGTCATTGATTCTAATCTGGCGTCCATTTACAAAGAAGAGATCTGCAAGGTACTCAACATCGGGATTCTCTGCACTAGCTCACTGCCAATTAACCGTCCTTCCATGCGCAAAGTGGTGAAGATGCTGCAAGAAGCAACATCGCACGACATGCCCAAAATTGGCAAGGAAGAGAAACTCTCCCCTTACTACGAGGAGGGCTTTGATCAAGGAGGCATGGTATGA 2937 0.4304 MFLCYPTPSLSLSQDGLYLLQVKSQLSDPTNALSSWNPRDDTPCNWFGITCDSTTKRVKSVNLPNLQLAGPFPIFLCRLPFVANITLLNNSINSTLSSMDFSNCESLEHLDLSQNLLVGSLPDSLSDIPNLRLLNLSGNNFSGEFPASFGRFQKLEYLYLHENLLNGTIPSSLGNISSLKELHLAYNPFTPSPIPSELGNLTNLEFLWLAYCNLVGTIPTSLGKLTRLTNLDLSINGLTGSIPSSIVELKSIIQIELYNNSISGTLPEGLSNLTNLRRFDASINSLTGTIPNELCRLPLGSLNLYNNHLEGSVPGSIALSPNLYEVKLFNNELSGQLPSELGKNSKLQSLDVSYNQFSGEIPRTLCENGELIDLILIYNKFSGKIPPSLGKCQSLNRVRLRNNKLSGDVPEGFWGLPHLYLLDLVGNSLSGAIPRSIYGANNLSGLLISNNQFSGSLPEEIGLLGNLIEFSGSRNKLTGSIPRNMVKLSQLGKLDLSYNGLTGGIPPGIHGWKKLNVLNLANNQLDGEIPSEIGSLQDLNFLDLSRNYFSGAIPSELQNLKLNLLNLSDNQLTGDIPQLYANQYYRNSFVGNPGLCGNLPRLCSNIAESKSRKYVWIFRSIIVLASVVFVTGLAWFYMKYRKFKKMKAGYTMTKWKSFHRLGFSEFEVVKYLDEDNVIGAGASGKVYKVTLSNGEVVAVKKLWASNKKESSSEGFDKDEFEVEVETLGNIRHKNIVRLWCCYKSGESKLLVYEYMPNGSLGDLLHSSKGRLLDWKTRYRIALDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGEFGAKVADFGVAKIVRGANQGAESMSVIAGSCGYIAPEYAYTLRVNEKSDTYSFGVVILELITGKRPVGPEYGEKDLVKWVWSTLDQKGVDHVIDSNLASIYKEEICKVLNIGILCTSSLPINRPSMRKVVKMLQEATSHDMPKIGKEEKLSPYYEEGFDQGGMV* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01431 978 Pfam Protein kinase domain 674 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01431 978 Pfam Leucine Rich repeat 343 360 IPR001611 GO:0005515
Pte1g01431 978 ProSiteProfiles Leucine-rich repeat profile. 561 583 IPR001611 GO:0005515
Pte1g01431 978 SUPERFAMILY RNI-like 301 582 - -
Pte1g01431 978 ProSiteProfiles Protein kinase domain profile. 672 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01431 978 SUPERFAMILY RNI-like 55 367 - -
Pte1g01431 978 Pfam Leucine rich repeat 88 141 IPR001611 GO:0005515
Pte1g01431 978 Pfam Leucine rich repeat 394 453 IPR001611 GO:0005515
Pte1g01431 978 Gene3D Ribonuclease Inhibitor 191 297 IPR032675 -
Pte1g01431 978 FunFam Leucine-rich receptor-like protein kinase family protein 194 292 - -
Pte1g01431 978 FunFam Receptor-like protein kinase HSL1 655 754 - -
Pte1g01431 978 Gene3D Ribonuclease Inhibitor 299 606 IPR032675 -
Pte1g01431 978 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 12 176 - -
Pte1g01431 978 Pfam Leucine rich repeat N-terminal domain 13 52 IPR013210 -
Pte1g01431 978 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 179 949 - -
Pte1g01431 978 FunFam Receptor-like protein kinase HSL1 298 605 - -
Pte1g01431 978 Gene3D Transferase(Phosphotransferase) domain 1 755 966 - -
Pte1g01431 978 Gene3D Ribonuclease Inhibitor 11 190 IPR032675 -
Pte1g01431 978 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 755 964 - -
Pte1g01431 978 SUPERFAMILY Protein kinase-like (PK-like) 666 947 IPR011009 -
Pte1g01431 978 ProSitePatterns Protein kinases ATP-binding region signature. 678 701 IPR017441 GO:0005524
Pte1g01431 978 SMART serkin_6 672 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01431 978 Gene3D Phosphorylase Kinase; domain 1 654 754 - -
Pte1g01431 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01431 Pte-Chr1 35915598 35918738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01431 10 979 Receptor kinase-like Gene Family AT1G28440 61.765 0.0 1199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte1g01431 Pkinase 1.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01431 - - mnt:21393816 1346.26