Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01429 ATGAACAATATCCTTTTGGGATTGATCGTGGGAGTCTCAGTTGGGGTTATAATTGGAACCGGCTTGGCAATTTCTGTAGTTTCCTGCCTTAGATATCGAAGGAGGAGTGTCAAACATGAAGATAATAGTTCTCATAAAGGATTGTCTCTCCCTGTCGTAGTCAATGAGGCTGAATCCAGCGCAGCTCCATCAGATTCAGTTGCAGAATCACCCAGAATATCTGAAGGGAGTAACTTACCATCGTGGATGGAAGGGCTTAAGAAGAAGAATGCAGGCTCAGCATGTGGAATACCAAAGTATACTTACAAAGAGGTGCAAAAGGCAACCTCAAATTTTACGACACTCATAGGAAAAGGAGCTTATGGCGCTGTTTACAAGGCTCAGATGGCTTCCGGTGAGACAGTTGCTGTTAAAACTTTAAGTTCTAATTCAAGGCGGGAGGAAAAGGATTTCTTTTCTGAGGTTATGTTACTTGGAAGATTACACCACAAAAATCTAGTTAATTTGGTTGGCTATACTGCAGAAAAGGGGCAACATATGCTTCTTTACGTTTACATGAGTAATGGGAATCTTGCTTCTCAATTATATGGCAATAATCACGCACCATTGAGCTGGATTACTAGGGTGCGCATAGCTCTAGATGTAGCAAGAGGATTAGAATATCTGCATTATGGGGCTGCTCCCCCTGTGGTGCATCGTGACATCAAACCTTCAAATATTCTGCTGGACCAGTCAATGAGAGCCAGGGTTGCTGACTTTGGACTGTCAAGACAGGAGATGGTCACACCTCGCCTGTCTAATGTCAAGGGAACATTTGGATATGTTGACCCCGAGTATATGAGCACAAGGACCTTTACTAAGAAAAGTGACGTTTATAGTTTCGGTGTGCTGCTATTTGAGCTTATTACTAGCAGAAATCCTCAACAAGGGCTAATGGATTATGTCGAGCTTGCAGCCATGAATGGTGAAGGAAGAATTGGATGGGAGGAAATTGTGGATTCAAACCTCAGTGGGCAATTTGAATTGCATGATCTGAATGTCTTGGCTGCTCTTGCATTCAAATGTGTTAATTGTGTCTCTAAAAACAGACCATCTATAAGAGAAGCAGTTCAGGTATTGTCTCAACTTTACAAAGCAAAGGAGGGTGTAGAGCTACCGAGAAAAAGCTATGCAGAAGTAGCAGAGCAGGTTCGCATTGAGATTGAACCGCAAGAAACCCAAATAGAAATTCAAAATTAG 1239 0.4229 MNNILLGLIVGVSVGVIIGTGLAISVVSCLRYRRRSVKHEDNSSHKGLSLPVVVNEAESSAAPSDSVAESPRISEGSNLPSWMEGLKKKNAGSACGIPKYTYKEVQKATSNFTTLIGKGAYGAVYKAQMASGETVAVKTLSSNSRREEKDFFSEVMLLGRLHHKNLVNLVGYTAEKGQHMLLYVYMSNGNLASQLYGNNHAPLSWITRVRIALDVARGLEYLHYGAAPPVVHRDIKPSNILLDQSMRARVADFGLSRQEMVTPRLSNVKGTFGYVDPEYMSTRTFTKKSDVYSFGVLLFELITSRNPQQGLMDYVELAAMNGEGRIGWEEIVDSNLSGQFELHDLNVLAALAFKCVNCVSKNRPSIREAVQVLSQLYKAKEGVELPRKSYAEVAEQVRIEIEPQETQIEIQN* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01429 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Pte1g01429 412 Gene3D Transferase(Phosphotransferase) domain 1 186 396 - -
Pte1g01429 412 FunFam calcium/calmodulin-regulated receptor-like kinase 1 186 394 - -
Pte1g01429 412 ProSiteProfiles Protein kinase domain profile. 110 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01429 412 Pfam Protein tyrosine and serine/threonine kinase 112 326 IPR001245 GO:0004672|GO:0006468
Pte1g01429 412 ProSitePatterns Protein kinases ATP-binding region signature. 116 138 IPR017441 GO:0005524
Pte1g01429 412 PANTHER OS01G0750732 PROTEIN 7 383 - -
Pte1g01429 412 SMART serkin_6 110 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01429 412 Gene3D Phosphorylase Kinase; domain 1 85 185 - -
Pte1g01429 412 SUPERFAMILY Protein kinase-like (PK-like) 96 380 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01429 Pte-Chr1 35870187 35873947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01429 92 385 Receptor kinase-like Gene Family AT3G19300 40.728 8.63e-71 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pte1g01429 PK_Tyr_Ser-Thr 5.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01429 - - qsa:O6P43_012500 526.168