Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01428 ATGTCGAAGAAGAAAGTTAGTGGTAATACGATGACCCTTAAAGACTTCCACGGAGGTTCTATACCCACTGATCTCCCTTTGCCTTCTGCTCCTGGCGTAACTGTCAGGCCTACCGATCGTTCTGGCTATGACCGACATACCTCATGGGTGAACCCCATAGGTCGATTTGATAATCGGTCTCGGCCACATTCATCACCTGCTACGAGGAATTTTGATGACAAAAGTCCATTCATTTCACAGACTGCTCAGATAGGCCGTAATTTTGATGAAGATGAACGTAGGCCGTTAGATGGTATTTCGGGACCCAGGAGAACTATAAGTGATGACAGTACTCGACTGTCGTCTGGAGGCATTGAGCTGAAGCCTGAATATAGTCCAGGAAGAGGTTTATCGGGTTGCCAGAGCAATGCTGCAGTGTCTCAATCTGCAGGTGCGGTGGTGAATTTGTACTCTGGGAGGGTTTCTGAAGTTTTTCATGGGGGAGCAAATCCTCAGCATTTTGGAGGGAAGAAAGAGCAAGGAGTTGAAAGTGGTCATCCAAACGCATGGGGAACAAGGAAGGAAATTACGAAAGTCGCCGAACCAGATGAATCTGTCTGGTCTCGGGGGCAAAGTGCTGTTTCAAAGTTGGCTCATGCTAGTGCAGTTGAAAAGGTATCATCTGGTAGATGGCAGTCAAAGACAGTTCATTATCAGACAGATGTGGAGAATGTTAGGGAATCTGAAAGGAGAAGTGCTTCACATTCCAATCATGCCTACAACAAGATTGATACATCGGGTGAAAAGGAACATTGTGATGCAATGCTAGCAAGGCATGCTGAGAAGGGTTTATATTTGGATGACCAGTCACATGGTAGTAGGAATGTCATTAAAGAAAGATCTGGGGCTTATAGACATGCAGATGTACCAGAGAGGAGCACATCTTATCATGGAAATGGCACGAAACCAGCTGGGCTTGATGGAAAATTGAGTGGGTCTGAGATGCAGCATTTTGTGCCTTCAGAACCATCAGAGCGACCTAAGCTTAAGTTACTACCAAGGACAAAGCCACTGGAGACTTCTGAACCTACTGCAGCGAACTATATGCAGGGATATCAATCATCAAATGAACAAGTCCATGCTGAACGTCCAAATGAAGTCTATGGAAATTTAATTTCTGCAAATCCTGACTTGGGTAACAATGAGAGTGTGAAGCATGTAGCATACCATCCGAAGCTTAATTTGAAGCCTCGTTCACATCCTGGTGAACAACGGGTGGATAACGTTGAAACAGCTAGGACACCATTGTTCTGTGGTGCTCGCCCACGAGAGTTGGTTTTGAAGGAACGAGGGGTTGATGATGTTGCCATTAATCATCGATATGACTTGGTTGACCTATCTAATAGGGTGGAGCAAAATGTTGTGAAGTCTGAAAAGGTTGATCATGCTAGCCCTAGACGTAATGGTGATAGGACCGGTGCTCCTTTTGACCAAAGGATCGGAAAGAAAACTGATAGGAAGGATCTGGGAGTTGATGCCGAAAGGGGTAACGTGCAGAGGAGGAACTGGCGTGGTGACAATAGAAGAAACAATAGAGAGGCTGAAAGGCAGCAGCCAACTGAGAGGCAACCTTCCCCTGATACATGGCGCAAGCCAGTTGAGGAGTCAAAACAATCTTCTCCTGCTGCTGTTGGATTACGCTATGGGAAAGCAGCATCAGCTTTGGATCTTGCTCAGGCATTCTCTAGATCAGTATCAGAACCAAAAAGAGGTGATAATTTTCCTGGTCAAAGAGGACTTGCAGGACGTCCACATGTGCCTTTCTCACGGAGGTTAAGAAAAGGAAAAATCAGTGTCTCCAAACTTGCCGGCCTCCGACGTTGCGGCAAGAGCTGCCACCTCCGTTGGACTAACTACCTCCGCCCTGATCTAAAGAGAGGCCTGCTTTCAGAAGTTGAGGAGCCGTTGGTCATCGATCTCCATGCCCGACTTGGCAATAGGTTGTTATTACTTTATTACACCTTAAATTAA 2010 0.4612 MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVTVRPTDRSGYDRHTSWVNPIGRFDNRSRPHSSPATRNFDDKSPFISQTAQIGRNFDEDERRPLDGISGPRRTISDDSTRLSSGGIELKPEYSPGRGLSGCQSNAAVSQSAGAVVNLYSGRVSEVFHGGANPQHFGGKKEQGVESGHPNAWGTRKEITKVAEPDESVWSRGQSAVSKLAHASAVEKVSSGRWQSKTVHYQTDVENVRESERRSASHSNHAYNKIDTSGEKEHCDAMLARHAEKGLYLDDQSHGSRNVIKERSGAYRHADVPERSTSYHGNGTKPAGLDGKLSGSEMQHFVPSEPSERPKLKLLPRTKPLETSEPTAANYMQGYQSSNEQVHAERPNEVYGNLISANPDLGNNESVKHVAYHPKLNLKPRSHPGEQRVDNVETARTPLFCGARPRELVLKERGVDDVAINHRYDLVDLSNRVEQNVVKSEKVDHASPRRNGDRTGAPFDQRIGKKTDRKDLGVDAERGNVQRRNWRGDNRRNNREAERQQPTERQPSPDTWRKPVEESKQSSPAAVGLRYGKAASALDLAQAFSRSVSEPKRGDNFPGQRGLAGRPHVPFSRRLRKGKISVSKLAGLRRCGKSCHLRWTNYLRPDLKRGLLSEVEEPLVIDLHARLGNRLLLLYYTLN* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01428 669 Gene3D - 600 638 - -
Pte1g01428 669 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 611 637 IPR017930 -
Pte1g01428 669 MobiDBLite consensus disorder prediction 235 259 - -
Pte1g01428 669 MobiDBLite consensus disorder prediction 1 132 - -
Pte1g01428 669 MobiDBLite consensus disorder prediction 468 533 - -
Pte1g01428 669 MobiDBLite consensus disorder prediction 1 16 - -
Pte1g01428 669 MobiDBLite consensus disorder prediction 161 186 - -
Pte1g01428 669 MobiDBLite consensus disorder prediction 577 598 - -
Pte1g01428 669 MobiDBLite consensus disorder prediction 61 85 - -
Pte1g01428 669 SUPERFAMILY Homeodomain-like 613 661 IPR009057 -
Pte1g01428 669 MobiDBLite consensus disorder prediction 468 557 - -
Pte1g01428 669 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 3 608 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01428 Pte-Chr1 35854724 35859162 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01428 611 660 MYB Transcription Factor Family AT4G12350 84.000 2.72e-21 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01428 - - qsa:O6P43_031733 626.706