Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01418 ATGCCGAATGGGAGCCTAGGTGATTTGTTGCACAGTAGCAAAGGAAGGTTGTTAGATTGGAAGACAAGATATAGAATTGCTTTAGATGCAGCTGAAGGACTGTCTTATCTGCATCATGATTGCGTTCCACCAATAGTTCATAGAGATGTCAAATCTAATAACATATTGTTAGATGGAGAGTTTGGAGCCAAAGTTGCAGACTTTGGAGTTGCTAAAATTGTTAGAGGTGCCAACCACGGCGCAGAATCGATGTCTGTGATTGCAGGATCTTGTGGCTATATTGCACCAGAATATGCATACACTTTACGTGTAAATGAGAAGAGCGATACTTATAGCTTTGGAGTAGTCATTCTGGAGTTAATAACAGGAAAGCGGCCTGTTGGTCCAGAGTATGGGGAAAAGGACTTGGTGAAATGGGTATGGTCAACTTTGGATCAGAAAGGTGTCGACCATGTCATTGATTCTAATCTGGCGTCCATTTACAAAGAAGAGATCTGCAAGGTACTCAACATCGGGATTCTCTGCACTAGCTCACTGCCAATTAACCGTCCTTCCATGCGCAAAGTGGTGAAGATGCTGCAAGAAGCAACATCGCTCGACATGCCCAAAATTGGCAAGGACGAGAAACTCTACCCTTACTACGAGGAGGGCTTTGATCAAGGAGGCATGGTATGA 675 0.4385 MPNGSLGDLLHSSKGRLLDWKTRYRIALDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGEFGAKVADFGVAKIVRGANHGAESMSVIAGSCGYIAPEYAYTLRVNEKSDTYSFGVVILELITGKRPVGPEYGEKDLVKWVWSTLDQKGVDHVIDSNLASIYKEEICKVLNIGILCTSSLPINRPSMRKVVKMLQEATSLDMPKIGKDEKLYPYYEEGFDQGGMV* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01418 224 PIRSF ILK 1 205 - -
Pte1g01418 224 ProSiteProfiles Protein kinase domain profile. 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01418 224 SMART serkin_6 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01418 224 ProSitePatterns Serine/Threonine protein kinases active-site signature. 45 57 IPR008271 GO:0004672|GO:0006468
Pte1g01418 224 Gene3D Transferase(Phosphotransferase) domain 1 1 209 - -
Pte1g01418 224 SUPERFAMILY Protein kinase-like (PK-like) 1 193 IPR011009 -
Pte1g01418 224 Pfam Protein tyrosine and serine/threonine kinase 1 193 IPR001245 GO:0004672|GO:0006468
Pte1g01418 224 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 196 - -
Pte1g01418 224 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01418 Pte-Chr1 35782027 35782905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01418 1 225 Receptor kinase-like Gene Family AT1G28440 72.294 1.99e-108 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte1g01418 PK_Tyr_Ser-Thr 4.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01418 - - qsa:O6P43_028854 375.555