Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01413 ATGACTCAGTGCAAAGTCCAAGACAACAACTTGAACACCCTAGTTGAAAGAAACGAAGAAAATGCCATTAGAGCTTGCCCTTCATGTGGTCACCATCTCAAATGCCAACGGCAGTCTAGAATTCATGATCTGCCTGGACTACCGGCTGGGGTGAAGTTTGATCCCACTGATCAGGAGATTCTTCAACATTTAGAAGCAAAGGTGAGATCGGATGCTGATAAGCATCACCCCTTGATTGATGATTTCATTCCAACCATTGATGGAGAGAACGGAATTTGCTACACCCACCCAGAGAAGTTGCCAGGAGTGAGCAAAGACGGATTGATCCGCCATTTCTTTCACCGACCTTCAAAAGCATACACTACAGGTACTAGGAAAAGGAGAAAGGTGCATTCTGATGCGGAAGGAAGCGAAACTCGCTGGCATAAAACAGGTAAAACTAGGCCTGTCTATATCAGTGGTAACCTGAAAGGATACAAGAAGATACTTGTGCTGTACACCAACAACGGGAAGCAAAGGAAGCCTGAGAAAACAAACTGGGTAATGCACCAGTACCACCTTGGCAACAATGAAGAGGAGAAAGATGGGGAGTTAGTGGTTTCCAAAATTTTCTACCAAACACAACCTAGACAATGTGGTTCCTTGCTGAAGGAGACTGTCACAGGCAAACTACGAGGGCCAAATGTGCATGAAGGCACAAACCATAAGAGCAATGCGTCAGTTCTTTACAATTACTCCCCTTTTATAACTTTTGATCAAGGTAGCCAACACAGGACTAGTACTGCTCATCTCATTCCCCAATTTGCCATCCATGATGGTTCTTTAGTTCCCTAA 834 0.4448 MTQCKVQDNNLNTLVERNEENAIRACPSCGHHLKCQRQSRIHDLPGLPAGVKFDPTDQEILQHLEAKVRSDADKHHPLIDDFIPTIDGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSDAEGSETRWHKTGKTRPVYISGNLKGYKKILVLYTNNGKQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKIFYQTQPRQCGSLLKETVTGKLRGPNVHEGTNHKSNASVLYNYSPFITFDQGSQHRTSTAHLIPQFAIHDGSLVP* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01413 277 FunFam NAC domain-containing protein 73 56 210 - -
Pte1g01413 277 SUPERFAMILY NAC domain 39 206 IPR036093 GO:0003677|GO:0006355
Pte1g01413 277 Pfam No apical meristem (NAM) protein 48 187 IPR003441 GO:0003677|GO:0006355
Pte1g01413 277 Gene3D NAC domain 56 210 IPR036093 GO:0003677|GO:0006355
Pte1g01413 277 MobiDBLite consensus disorder prediction 126 141 - -
Pte1g01413 277 ProSiteProfiles NAC domain profile. 47 206 IPR003441 GO:0003677|GO:0006355
Pte1g01413 277 MobiDBLite consensus disorder prediction 121 141 - -
Pte1g01413 277 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 18 235 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01413 Pte-Chr1 35690395 35692785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01413 24 225 NAC Transcription Factor Family AT4G28500 77.340 5.71e-117 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte1g01413 NAM 5.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01413 - - gmx:100791648 449.899