Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01407 ATGGATTTGAAGGATCAATCGCAGAAGAAAATGAATAAAGATACCAAGAAGAAAGGCGGTTCTTCTGCATGTCATCAATTGAAGGAAAAGGAAAAGCACAGGGTCAATGACCTCCAAGGATTTCTTAATGATCTTCGATTGGCAATGAAGGAGAGTCGAGTCGGTGATGTTGCTGTTTTGGAGGAGCAAGTGAGTCAGATGCTCAAAGAATGGAATGCGGAGTTGAACGAGGCAACACCGACTTCTTCATTAGATGGCGGAAGTCTTGGATCGTTTGCTAAGAACATAGAACAGTTATTGCAATTGCAACCACTTGAGGAAGAGGATGATGCCATTAGCCCATTGACGAGACCAACATTGAAAAATGAATCTCCTCTCCATAGCCTCCATTTAGGAAACTATTCACCAGAGGATTTTCTTCTTGACGACCAGTCACAAGGACATGGTTTTCAAGGCTTTGATCCATTTGAGACTTCTGCTTCAAACCTGTATAATACAGTGGTTAACACATCTGTTACAATTAGTTCATTGGATCATCCTCAATTTGATTTGCATCAAGACTTTGACTGTGGGGAGTTTGTTATAAAAGATGATTTGAAACAATGTGAAGAGGAGGCTATACCTGACAATTTCCCAGATATCTGCCCTCCACCATCTGCTTTTCTGGGGCCAATATGTGCATTATGGGATTGCTTTAGGCCTGCGCAGGAGCTCCACTACTACTGCATGAAAAGTCATGCAGTGCTAGCATTTACTGAGGGTCTATCTTGCATGACTCCAATTTTACGGCCTCAGGGCATTGGAATAAAGGACACTCCATTATTTACTGCTCTTCAGGCAAAGGCACAGGGAAAGGAAGTGGGTATCCCCATATGCGAAGGTGCAGCTTCAGTTAAGTCGCCATGGAATGCTCCTGAGCTATTTGATCTGTCTTTACTCGAGGGTGAAACAATTCGGGAGTGGCTGTTTTTTGACAGGCCTAAAAGGGCCTTTGAAACTGGAAATCGAAAGCAGAGGTCACTGCCAGATTACAATGGGCGTTGGCATGAGTCAAGGAAGCTACCAATGCCTGGGGGACAGAAGAGGTCCTATTACATGGACCCGCAGCCTTATAGTGATAGAGAATGGCATTTATATGAATACGGACTCAGTAACTACGATGGTTGTGCATTGTATAGATTAGAATTAAAGCTGGTTGACCGAAAGAAGAGCCCTAAGGGGAAAGTTTCTAAGGAATCCTTTGCTGCGTTGAAGAATGAGAAGAGCCCTAAGGAGAGAGTTTCTGAAGAATCTTTTTCCGGTACAAAGAACGAGAAGAGTCCTGAGGGAGAAGTTTCTAGGGAATCTCTTGCTGAACTAGAGAAGAAGATGGGAAAGCTGTCTGCTGATTCTGCAGTCGATGATAGTCCTAGTTTTGCTTTGGGAAAGGACAAGGTTGAGCCTGTAGCTGTTGACTCCTGA 1461 0.4374 MDLKDQSQKKMNKDTKKKGGSSACHQLKEKEKHRVNDLQGFLNDLRLAMKESRVGDVAVLEEQVSQMLKEWNAELNEATPTSSLDGGSLGSFAKNIEQLLQLQPLEEEDDAISPLTRPTLKNESPLHSLHLGNYSPEDFLLDDQSQGHGFQGFDPFETSASNLYNTVVNTSVTISSLDHPQFDLHQDFDCGEFVIKDDLKQCEEEAIPDNFPDICPPPSAFLGPICALWDCFRPAQELHYYCMKSHAVLAFTEGLSCMTPILRPQGIGIKDTPLFTALQAKAQGKEVGIPICEGAASVKSPWNAPELFDLSLLEGETIREWLFFDRPKRAFETGNRKQRSLPDYNGRWHESRKLPMPGGQKRSYYMDPQPYSDREWHLYEYGLSNYDGCALYRLELKLVDRKKSPKGKVSKESFAALKNEKSPKERVSEESFSGTKNEKSPEGEVSRESLAELEKKMGKLSADSAVDDSPSFALGKDKVEPVAVDS* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01407 486 MobiDBLite consensus disorder prediction 334 356 - -
Pte1g01407 486 MobiDBLite consensus disorder prediction 1 31 - -
Pte1g01407 486 MobiDBLite consensus disorder prediction 409 462 - -
Pte1g01407 486 MobiDBLite consensus disorder prediction 409 486 - -
Pte1g01407 486 PANTHER TRANSCRIPTION FACTOR VOZ1 11 419 IPR039277 GO:0006355|GO:0048578
Pte1g01407 486 MobiDBLite consensus disorder prediction 334 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01407 Pte-Chr1 35636567 35640804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01407 11 420 VOZ-9 Transcription Factor Family AT1G28520 54.824 2.15e-135 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Pte1g01407 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01407 - - qsu:112017285 485.337