Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01395 ATGGATGCTGTGTCTTCGAGTTTGGGCATGGATGGGGTTGTCTCTGAGGCATTCACTGAAGGTGTTTTGGTGGATTCTGCCTTAACGAGAAGTGGGTTTGCTTCATCGTCGTCTTTGGTTTTGGATACTGATAGAGGTGAACTGGTGGAGGCACCTATCAAATTGGAGCGCAAGGGGGTGTCCTCCGAGAGAAGTGCTTCGGCATTGAAGAACCATAGTGAAGCAGAACGGAGAAGGAGAGCTAGGATTAATGCACATCTAGATTCACTTAGGACTGTAATTCCTGGTGCTAATAAGATGGACAAGGCGTCCTTACTTTTTGAAGTCATCAAGCACTTGAAAGAGCTGAAGAAGAGCGCAGCACAAACTTGTGATGGTTTTTTAATGCCAAAGGACACAGATGAAATAAAAGTCGAGCTGCTTGATCAACAAGAGTATGGATGGGATGGTATCCCTTATGCAATTAGGGCGTATCTTTGTTGTGAATATAAGCCGGGACTATTATCTGATATCAAGCAGGCCCTTGATTCCCTCCACCTCATGATAATGAGGGCTGAGGTTGCAACCTTAGGAAGCAGGATGGAAAATATCTTTGTATTAACTAGCTGTCTGACACAACATAGAGAAGTTAATGAAACGCGTCAGTTACTTGTTTGCTCTGTTGACAAAGCCCTCAAGTCCGTATTGGATAGATTCTCTACTTCCCATGACTTTCTAGGACGCTCAAACAAGAGAAGTAGGATACTATTCTAA 753 0.4382 MDAVSSSLGMDGVVSEAFTEGVLVDSALTRSGFASSSSLVLDTDRGELVEAPIKLERKGVSSERSASALKNHSEAERRRRARINAHLDSLRTVIPGANKMDKASLLFEVIKHLKELKKSAAQTCDGFLMPKDTDEIKVELLDQQEYGWDGIPYAIRAYLCCEYKPGLLSDIKQALDSLHLMIMRAEVATLGSRMENIFVLTSCLTQHREVNETRQLLVCSVDKALKSVLDRFSTSHDFLGRSNKRSRILF* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01395 250 Gene3D - 61 124 IPR036638 GO:0046983
Pte1g01395 250 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 116 IPR011598 GO:0046983
Pte1g01395 250 SMART finulus 73 122 IPR011598 GO:0046983
Pte1g01395 250 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 60 119 IPR036638 GO:0046983
Pte1g01395 250 Pfam Helix-loop-helix DNA-binding domain 71 116 IPR011598 GO:0046983
Pte1g01395 250 PANTHER TRANSCRIPTION FACTOR BHLH30 31 248 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01395 Pte-Chr1 35533783 35535923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01395 54 248 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 35.385 8.63e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte1g01395 HLH 2.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01395 - - qsa:O6P43_000813 296.589