Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01389 ATGGATGTTAAGCTGAAGTTGATGCGCTCCACTCTCATCTTTACTTTTATTTCTGCAAATGCTTTTCTTGAGTCATCCTTGATACTTGATGGTGAGGATCTAACCAAATTTCAATGGGGACAAAATGAAGAATGGGAAAACTGTGGTAAGAGCTCCGATTTTGGGTGGATGCAGATTGCGGAACCTGTGTTGAAATTGTATACGGAGTCTACTGATGGTTCTTGCATCGAAACTAAGGAAAGTGCTTTGGTTTGGCAGTACCGGGATGCAGATCCAGGTTTTGGATCAGCTCAGGCTAAGGAACTGTTAGATCATCTAGAGAGTGTTTTGGCGAATGAACCAGTTGCTGTAAAAAGTGGCCAGTTTATTGTTGAAGTAAAACCCCAGGGTGTGAGCAAAGGCCTAGTTGCTGAAAAAATCTTTTCAACAATGGCTGAGAAGGGGAAACAGGCTGAGTTTGTCCTATGCGTTGGTGATGACAGATCTGATGAAGACATGTTTGAAATTATTGGCAGTGCATTGTCAAGAAATATGCTTTCTGCCAATGCGTCTGTATACGGTTGTACAGTAGGTCAAAAGCCGAGTAAAGCAAAGTATTATCTGGATGACACTGGTGAAGTAAGAAGCATGCTCGAATCTATGGCTGAGGCTTCTTACTCTTCACTTCACAAAGAAGAAACTGAAAGTTAA 690 0.4174 MDVKLKLMRSTLIFTFISANAFLESSLILDGEDLTKFQWGQNEEWENCGKSSDFGWMQIAEPVLKLYTESTDGSCIETKESALVWQYRDADPGFGSAQAKELLDHLESVLANEPVAVKSGQFIVEVKPQGVSKGLVAEKIFSTMAEKGKQAEFVLCVGDDRSDEDMFEIIGSALSRNMLSANASVYGCTVGQKPSKAKYYLDDTGEVRSMLESMAEASYSSLHKEETES* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01389 229 NCBIfam trehalose-phosphatase 41 215 IPR003337 GO:0003824|GO:0005992
Pte1g01389 229 SUPERFAMILY HAD-like 39 214 IPR036412 -
Pte1g01389 229 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 96 228 - -
Pte1g01389 229 Gene3D - 42 201 IPR023214 -
Pte1g01389 229 Pfam Trehalose-phosphatase 30 203 IPR003337 GO:0003824|GO:0005992
Pte1g01389 229 Gene3D - 50 129 - -
Pte1g01389 229 FunFam Trehalose-6-phosphate synthase 2 50 129 - -
Pte1g01389 229 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 37 216 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01389 Pte-Chr1 35498572 35500120 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01389 37 221 Trehalose Biosynthesis Gene Families AT1G06410 77.297 1.52e-97 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01389 K16055 - qsa:O6P43_000837 330.872