Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01388 ATGGAATGTAGAGTTCATACAAACCCTGCTATCAGTGATTCAGAAGAACCCTCAGAAACAACAGCGCCCAACTCTCCCTCTTGGGATGACATAAAAGTTGAAGCACCTTCACCTAAGAAAAGGAAAACGATGCAGAAGAAGGTGGTGTCCGTACCGATCAGTGAAGTAGAAGGATCAAAGAGCAAAAGTACTGATACGTATCCTCCGTCTGATTCATGGGCTTGGAGGAAGTACGGCCAAAAATCCATTAAAGGCTCTCCTTACCCACGGGGATATTATCGATGTAGCAGTGCAAAAGGGTGCCCCGCCAAAAAACAAGTAGAGAGAAGCCGAGCGGACCCCACAATGCTTATAATAACCTATGCCTACGATCACAACCATCAACCTGCTAACAAATCGAATGCCTCCACATCACCACCCTCGCCCCCCAGCACTCCAACTATCTCAAACAGCGATGCCGGCTCATCAGGTGGTGCAGCCGTTTCAACCAACGAGTCATCCAGCTCAATGTTTCAGTGCGAAGACATGATGGTTTTCAGGGAGTCATCCAAATTCGAACTTCCTAGTTCAGATACGGCGGGGGCTTTACTCGACGATGAATTCGGCTGGTTGAATGAGATAGCTTCCACTAGCGTACTTGAGAGTCCGATCTGCTTGGTGGAGGATGACGTGGCATGGATCACGATGGAAGAGAGCGATGCTTTGTTCGCCGATCTCGGTGAATTACCGGAGTGTTCGGCTGTTTTCCGACGTAGTAGACTGAGTTTAAGCGCGAGCGTGATTGCTTGCGGTGGCAAAACGCGATAG 807 0.4907 MECRVHTNPAISDSEEPSETTAPNSPSWDDIKVEAPSPKKRKTMQKKVVSVPISEVEGSKSKSTDTYPPSDSWAWRKYGQKSIKGSPYPRGYYRCSSAKGCPAKKQVERSRADPTMLIITYAYDHNHQPANKSNASTSPPSPPSTPTISNSDAGSSGGAAVSTNESSSSMFQCEDMMVFRESSKFELPSSDTAGALLDDEFGWLNEIASTSVLESPICLVEDDVAWITMEESDALFADLGELPECSAVFRRSRLSLSASVIACGGKTR* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01388 268 MobiDBLite consensus disorder prediction 1 85 - -
Pte1g01388 268 Pfam WRKY DNA -binding domain 71 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g01388 268 ProSiteProfiles WRKY domain profile. 64 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g01388 268 SUPERFAMILY WRKY DNA-binding domain 65 129 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g01388 268 Gene3D WRKY domain 41 122 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g01388 268 MobiDBLite consensus disorder prediction 128 164 - -
Pte1g01388 268 MobiDBLite consensus disorder prediction 147 164 - -
Pte1g01388 268 MobiDBLite consensus disorder prediction 11 27 - -
Pte1g01388 268 SMART WRKY_cls 69 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g01388 268 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 13 247 IPR044810 GO:0003700
Pte1g01388 268 FunFam WRKY transcription factor 65 53 130 - -
Pte1g01388 268 MobiDBLite consensus disorder prediction 56 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01388 Pte-Chr1 35484422 35486222 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01388 10 251 WRKY Transcription Factor Family AT1G29280 44.788 1.75e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte1g01388 WRKY 6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01388 - - gmx:100170680 259.61