Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01387 ATGTCAAGGTCGTATACCAATCTCTTAGATTTGGCTTCTGGTAATTTCCCAGCCATGGGAATTGGAAGTGGTTTTAAAGAGCGGAAGCGTCTTCCTAGGGTTATGACTGTCCCTGGCAACATAGCAGAGTTAGATGAGGATCAAGCACATAGTGTTTCTTCTGAAAATCCATCTATGGCTTCTATAGATCGGATGATCATTGTAGCAAACCAGCTTCCATTAAAAGCAAAGCGGAGAGACGATAATAAAGGATGGGACTTCAGTTGGAATGAGGATTCTTTGCTATTGCAGCTCAAGGATGGACTTCCAGAAGATATGGAGGTCATTTACGTCGGTTCATTGCGGGCTGATATTGATCCAAAAGAGCAAGATGACGTGTCTCAAATCTTACTGGACAGATTCAAATGTGTTCCAACATTTCTGCCTGCCGACCTGTTGGCTAAATTCTACGATGGCTTCTGCAAGAGACATCTGTGGCCACTTTTCCATTACATGCTACCGTTTTCAACTGATAAAACACTTCGTTTTGATCGATCTCTATGGGAGGCTTATGTATTGGCAAATAAACTATTTTTTCAGAAAGTAGTTGAAGTAATAAATCCAGAAGATGATTATATATGGATTCATGATTACCACTTAATGGTACTGCCAACCTTTATAAGAAGACGGTTTAACAGGGTAAGATTGGGTTTTTTCCTTCATAGCCCTTTTCCTTCTTCAGAGATATATAGGACTCTCCCTGTAAGAGAAGAGATACTCAAGGCTTTACTGAACTCTGATATCATTGGCTTCCACACCTTTGACTATGCTCGCCATTTCCTTTCTTGTTGCAGTCGCATGTTAGGTTTGGAGTATCAGTCGAAAAGGGGCTACCTGGGGTTGGAATACTATGGGAGGACTATCAGTATCAAGATTATGCCAGTTGGGGTTCACATGGGTCGAATTGAATCAGTGATGAAAATGGCAGATGAGGAGACTAAACTAAAGCAGCTCAGACAGCAATTCGAAGGAAAAACAGTGTTGCTTGGTGTTGATGATATGGATATCTTCAAAGGCATTAACTTGAAACTTTTGGCGATGGAGCAGTTGCTTAATCAGCATCCCGAGTGGCAGGGTAGAGCTGTACTGGTTCAGATAGTAAACCCTGCTAGAGGCAATGGAATTCATCTAGAGACCACAAAGGCTGAGATACAAGAAATCTGTACGAGAATAAATAGACTCTATGGCCGCCCTGGCTATGATCCAATAGTCTTTATTGACAGATTAGTTTCAGTTGCTGAAAAAGTTGCTTACTACAGCATTGCTGAGTGTGTTGTTGTCACTGCTGTAAGGGATGGGATGAACCTAACTCCCTATGAATATATTGCTTGTAGGCAGGGAATATCTGATTCAGGCCCCAAGAAGAGCATGCTTGTAATATCAGAATTTATTGGGTGCTCTCCATCTCTTAGTGGAGCAATCCGTGTGAATCCATGGAATTTTGAGATGACTGCAGAAGCACTCAATGAGGCTATTTCAATGGCTGATTCAGAAAAACAGTTGCGGCATGAAAAGCATTATCGATATATTAGCACTCATGACGTGGCCTATTGGTCGCGCAGTTTCTTGCAGGATATGGAAAGAGCTTGCACAGACCTACTGAGGAAACGGTGCTGGGGTATCGGTCTCAGCTTTGGGTTCCGAGTTGTGGCACTTGATCCAAACTTTAGGAAGCTGTCAGTTGATGCTATTGTGTCATCTTACCAAAGGTCAAAGAATAGAGCTATTTTGTTAGATTACGATGGCACTGTAATGCCGCAGAACTCTATTAACAAGTCACCAAGTCAAGAGGTTATCTCAATTCTGAACACACTTTGCGCAGACCCAAAAAATGTAGTTTTCATTGTTAGTGGCAGGGGGCGGGAAAGCTTAAGTAATTGGTTCTCTCCCTGCAAGAAACTTGGGATTGCAGCAGAACATGGATACTTCATAAGGTGCCCAATCTCTCTTTTTCTGGGGCCTCTGTGTGTCTGGATGCATGCTTGTGGTATGAATGTCTGTGTATATGAATTTCGTTTGTTGTAA 2064 0.422 MSRSYTNLLDLASGNFPAMGIGSGFKERKRLPRVMTVPGNIAELDEDQAHSVSSENPSMASIDRMIIVANQLPLKAKRRDDNKGWDFSWNEDSLLLQLKDGLPEDMEVIYVGSLRADIDPKEQDDVSQILLDRFKCVPTFLPADLLAKFYDGFCKRHLWPLFHYMLPFSTDKTLRFDRSLWEAYVLANKLFFQKVVEVINPEDDYIWIHDYHLMVLPTFIRRRFNRVRLGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGVHMGRIESVMKMADEETKLKQLRQQFEGKTVLLGVDDMDIFKGINLKLLAMEQLLNQHPEWQGRAVLVQIVNPARGNGIHLETTKAEIQEICTRINRLYGRPGYDPIVFIDRLVSVAEKVAYYSIAECVVVTAVRDGMNLTPYEYIACRQGISDSGPKKSMLVISEFIGCSPSLSGAIRVNPWNFEMTAEALNEAISMADSEKQLRHEKHYRYISTHDVAYWSRSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFRKLSVDAIVSSYQRSKNRAILLDYDGTVMPQNSINKSPSQEVISILNTLCADPKNVVFIVSGRGRESLSNWFSPCKKLGIAAEHGYFIRCPISLFLGPLCVWMHACGMNVCVYEFRLL* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01387 687 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 586 662 - -
Pte1g01387 687 Pfam Trehalose-phosphatase 590 660 IPR003337 GO:0003824|GO:0005992
Pte1g01387 687 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 64 544 - -
Pte1g01387 687 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 57 316 - -
Pte1g01387 687 FunFam Alpha,alpha-trehalose-phosphate synthase 318 524 - -
Pte1g01387 687 Gene3D Glycogen Phosphorylase B; 318 524 - -
Pte1g01387 687 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 32 659 IPR001830 GO:0003824|GO:0005992
Pte1g01387 687 Pfam Glycosyltransferase family 20 64 540 IPR001830 GO:0003824|GO:0005992
Pte1g01387 687 Gene3D Glycogen Phosphorylase B; 58 317 - -
Pte1g01387 687 CDD GT20_TPS 64 540 IPR001830 GO:0003824|GO:0005992
Pte1g01387 687 Gene3D - 586 668 IPR023214 -
Pte1g01387 687 SUPERFAMILY HAD-like 587 660 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01387 Pte-Chr1 35478653 35480716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01387 1 658 Trehalose Biosynthesis Gene Families AT1G06410 77.225 0.0 1080
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01387 K16055 - gmx:100800847 1180.62