Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01380 ATGTCCCTCATAATTGAAGCATCCGTTGAGTGTTGTGTATGGAGTCTCGTGGATTTGAGGGTTTTTTTTGTGGTTTGGGATGTCTTGAGCAATGAGAAAGTAGTTGAGATAGTATCTTCAGCTCCATCCAGGACATCAGTTGCAAGGACTTTTGTGGACTCAGCAACTAATGAATGGAAAGTCAAATACCCGACATCAAAGATGGACGACTGCGTTGTGATTTGTTTATTTTTGGATGGAAAAATGGATGCAGAATCTGATAACGAAGAACAAAGCTTTTCATATGCTACCATCCAAAATAACCATTCAGGCACTGCAATTGAAACAGATGATAGGCAGAAATCTGAGCCAACTTTGCATAGAAACTTCACTGTAAGACCCTTGGAAGATAAGAATACTTATGCACAAGTACCTATTGATGGGGATGAGACATTATCAACTGAAGATCAAAACTGGTCTGGGTTGGATGGTGTCACTCGGGTGAACTCACTGGTTCAACTTCCTAGATTTTCTGATGAACAGCGTAACTCCTGA 534 0.4064 MSLIIEASVECCVWSLVDLRVFFVVWDVLSNEKVVEIVSSAPSRTSVARTFVDSATNEWKVKYPTSKMDDCVVICLFLDGKMDAESDNEEQSFSYATIQNNHSGTAIETDDRQKSEPTLHRNFTVRPLEDKNTYAQVPIDGDETLSTEDQNWSGLDGVTRVNSLVQLPRFSDEQRNS* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01380 177 Gene3D - 24 92 IPR036457 -
Pte1g01380 177 SUPERFAMILY PP2C-like 25 80 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01380 Pte-Chr1 35385096 35387970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01380 25 174 PP2C-type Phosphatase Gene Family AT1G03590 60.127 1.70e-49 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01380 - - qsa:O6P43_028780 235.728