Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01378 ATGGACCAGGCAGGCAAGCAGGGAGAAGATGAATTTGCAGTAGAGGTGGAGTTGCTTGGTCGATTGCGCTCTCCTTATCTGTTGGCTTTGCTTGGCTATTGCTCGGACCATAATCATAAATTGCTGGTCTATGAGTTCATGTCCAATGGAGGTTTACAGGAACATTTATATCCTGTCAGCAATTCAAATGTTATAGCCGTGAAGCTGGATTGGGAAACACGATTGACAATAGCACTTGAAGCAGCCAAAGGTTTAGAATATCTCCATGAGCATGTTAGTCCCCCTGTAATACATAGAGATTTTAAGAGCAGTAATATCCTCTTGGACAAAAAATTTCATGCCAAAGTGTCAGATTTTGGATTGGCAAAGCTTGGATCTGAAAAGGCTGGTGGACATGTTTCTACTCGAGTTTTAGGCACCCAAGGATACGTTGCCCCTGAATATGCACTTACTGGACATTTGACAACAAAGTCAGATGTATATAGTTACGGCGTTGTACTCCTAGAGCTGCTTACTGGTCGAGTACCTGTTGATATGAAGAGACCTCTTGGAGAAGGTGTTCTTGTTTCTTGGGCTTTACCTATGCTAACGGATAGAGACAAAGTCATAGAGATAATGGATCCCTCATTGGAGGGTCAGTACTCAATGAAGGAGGTTGTCCAGGTTGCCGCAATTGCTGCAATGTGTGTGCAACCTGAGGCAGATTACAGGCCACTGATGGCGGATGTTGTACAGTCCTTAGTCCCACTTGTGAAGAGTCAAAGATTGGCTCCTAAGGCAGGTTGCTCCCCGGGTTTCCATGACGCTAAGATGTCTATTGCACATGATTCTAGCAGACCCAGTGTTTGA 849 0.4464 MDQAGKQGEDEFAVEVELLGRLRSPYLLALLGYCSDHNHKLLVYEFMSNGGLQEHLYPVSNSNVIAVKLDWETRLTIALEAAKGLEYLHEHVSPPVIHRDFKSSNILLDKKFHAKVSDFGLAKLGSEKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPLGEGVLVSWALPMLTDRDKVIEIMDPSLEGQYSMKEVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKSQRLAPKAGCSPGFHDAKMSIAHDSSRPSV* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01378 282 PANTHER OS07G0668900 PROTEIN 1 255 - -
Pte1g01378 282 SUPERFAMILY Protein kinase-like (PK-like) 6 247 IPR011009 -
Pte1g01378 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 96 108 IPR008271 GO:0004672|GO:0006468
Pte1g01378 282 FunFam Receptor-like serine/threonine-protein kinase ALE2 47 262 - -
Pte1g01378 282 Gene3D Transferase(Phosphotransferase) domain 1 48 260 - -
Pte1g01378 282 Gene3D Phosphorylase Kinase; domain 1 1 47 - -
Pte1g01378 282 Pfam Protein tyrosine and serine/threonine kinase 4 247 IPR001245 GO:0004672|GO:0006468
Pte1g01378 282 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01378 Pte-Chr1 35317770 35319974 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01378 1 270 Receptor kinase-like Gene Family AT3G58690 82.288 2.36e-164 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pte1g01378 Pkinase 7.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01378 - - qsa:O6P43_028923 483.026