Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01376 ATGGATGAAAGGACTGATGTATCAGACGACGAGAAGAGCAGTGGAAGTGAATATATGCAAGAGAAATCTTCGTTTCTACCAAGTCCACAAAAACGTTCATTCTTTGATCTGAATGAAGAAGCCACTGATCATGATGGGGCTGACAGCAGTAGTGTTGGTGATGTTCCACCTGAAGAAGTAAGCCATGACAGGTCATCCCCAGAAGGAAACCTGAGTAGCAATTGCTCAGGTCCTGATGGCAAACCAAGAGCAACAGTGAGGCAATATGTTAGGTCTAAAATGCCAAGGCTACGTTGGACTCCAGATCTTCATTTTGCGTTTGTGCATGCTGTAGAGAGACTCGGTGGCCAAGAAAGAGCAACCCCTAAATCGGTTCTTCAGTTGATGAATGTGAGAGGACTTAGCATTGCTCATGTCAAAAGTCATTTGCAGATGTACAGAAGCAAAAAACTAGATGAGTCAGGCCAAGTCTTATCTCAGACAAATAGATCAATGCAAGGAAGAAGTCACCTTTGGGAATTGTATCCGAGATTCAGTGCTCCTGGGCAATATAGAATGGTGAACAGAACTCAATTATCAACGACTTTCCCAATCGAACAGACACTCAGCTCATCAAGATTCCAGACATATCATTTCAACGATCACTTTACAAGGACATCTGGTTCGTTATGGAGCACAAAACCTGCAGGAGTATCACACAAGGTGCCCCATGACTCTACATTTTTTCATAAAGGTAATAACATGACAAGCTCACATCTCTCGGATGTAAGGGACGCTGTAACAAGAAATGGACCACTTCGACCTTGCCAATTTCTTGAAGAGAAGAGGTGGCCACCACGTGAAGTGATAGACATTAAAGGGACTACCCACGAACAATATCCTCTAAGCATCTTTCTGGACAATAAATACACTGCACAACATTCTTTATGGAGCACCATGGCTAACGCTACTGGTCGTTCACAAAGTTCATGTAGCAGTTCAATATTCAATCACGGACCTCATGTCAATGGAAACCCCATTGAGTTTCAGGTGAGCTATAAGCAAGAAGAGGGGAGTTTCCCATTCACAAATGATCAACTTCTACAGAGGAATGCGACTAGACCTGAAACAGAGTTGGATCTGGGGAAGAAATGCCAACCAAATTTGCAGCTAAGTTTGAATAATGATATTCCAAGTGCTGGAGAAATGATCAACATGGTTCAAGGTTGTGAAAAGGATAACAGTTCTATGCTTTCTCTCTCGCTGTTTCCTACATTCGTCAAGGCAAGAAATACAGCATGA 1281 0.427 MDERTDVSDDEKSSGSEYMQEKSSFLPSPQKRSFFDLNEEATDHDGADSSSVGDVPPEEVSHDRSSPEGNLSSNCSGPDGKPRATVRQYVRSKMPRLRWTPDLHFAFVHAVERLGGQERATPKSVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQTNRSMQGRSHLWELYPRFSAPGQYRMVNRTQLSTTFPIEQTLSSSRFQTYHFNDHFTRTSGSLWSTKPAGVSHKVPHDSTFFHKGNNMTSSHLSDVRDAVTRNGPLRPCQFLEEKRWPPREVIDIKGTTHEQYPLSIFLDNKYTAQHSLWSTMANATGRSQSSCSSSIFNHGPHVNGNPIEFQVSYKQEEGSFPFTNDQLLQRNATRPETELDLGKKCQPNLQLSLNNDIPSAGEMINMVQGCEKDNSSMLSLSLFPTFVKARNTA* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01376 426 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 65 184 IPR046955 GO:0003700
Pte1g01376 426 FunFam Myb family transcription factor 93 151 - -
Pte1g01376 426 MobiDBLite consensus disorder prediction 1 84 - -
Pte1g01376 426 SUPERFAMILY Homeodomain-like 93 149 IPR009057 -
Pte1g01376 426 MobiDBLite consensus disorder prediction 1 17 - -
Pte1g01376 426 Pfam Myb-like DNA-binding domain 97 147 IPR001005 -
Pte1g01376 426 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 151 IPR017930 -
Pte1g01376 426 Gene3D - 94 151 - -
Pte1g01376 426 NCBIfam myb-like DNA-binding domain, SHAQKYF class 95 150 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01376 Pte-Chr1 35303986 35306468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01376 86 156 G2-like Transcription Factor Family AT2G42660 76.056 3.04e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte1g01376 Myb_DNA-binding 2.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01376 - - qsa:O6P43_028920 366.696