Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01375 ATGGAAGAGTTACAAGAAGATTCAGTCCCGGCAGAGCAAGGTCCATCTAATGCTTTGTGGTGGACTTCAAATTTTGAGGAAAAATTTAGAACTGTCTCTTTAGGTTCTCCAGGAGGAACATTAAGTAATAGGGGATCACCCAGAAATACTGAGCAAACTGTCTTGTCAGGCCAGAAGGCATCACAAATCTTATGGAACACTGGGACTCTATCTGAACAGATACCTAGTGGTTTTTATTCGGTTATTGCGGAGAAAAGGCTAAAGGAGCTTTTTGATGGTCTTCCCAGTATGGATGAGCTCCAGTCTTTAGGTGCAGAGGGTTTCAAGGCTGATGTCATTCTTGTAGACTTTGAGAAGGATAAAAAGTTATCAATGTTGAAGCAACTCATTGTTACATTAGTGAAAGGATTAAACTCTAATCCTGCTGCAATGATTAAAAAAACAGCTGACTTGGTTTCCGACGTTTATAAACGACCAATAGAAAGTCCAGCAAAATCTGTTGTAGAGGAAAGCTCCAACATGTTTGAACCCCGAGGTGTTCAGATGCTTGGGCAAATAAAGCATGGTTCTTGTCATCCTCGGGCAATATTATTTAAAGTTCTAGCAGATAGTGTAGGTCTTGAAAGTAGTCTTGCAGTGGGTCTGCCAAATGATGGGACTGTGGAGTGTCCTGACTCTTACAAGCACGTGTCAGTGATAGTTGTATTAAATTCTGTGGAAATGTTGGTTGACCTCATGCGATTTCCTGGGCAACTATTACCTCGATCAACAAAGGCCATTTTAATGACCCATATTTCTGCAGCAGGGGAGAGTGATTCTGCTGAAAATGACTCCTGTGACTCACCTCTAGAGCCCAACAGTCCCTTGTATAGCTTGCCTGACCGTATGGATCCTGACAGTATGGAAAAGGATGAGCATTTGCAGTTCCATAAAAGATTTGAAACATCTTCAAGTTTGCGAAATATGATGTTGCGGTCGGGCACTGCTTTGGATAGAAAAATGAGTTTGTCACATAGTGAACCCAACATTGCAACTACATTTTGGCAGCGTAGCCGGCAAAAGGTCATTGCTGAACAGAGGACTGCTTGTTCAAGTCCAGAACATCCTTCATTTCGTGTTCGTGGGCCCTCCATGCTTAGTGGTGATAGGAAATCATTTAGAGGATTTGCTGACGACGTGGCTACATCAAGGTACAGATCTGAAGGTGCATCATCTTCTGACACTCGAAGGATGAGAAGGCGAAGCATCAGCATAACACCAGAGATTGGTGATGATATTGTGAGGGCTGTACGGGCAATGAATGAAACACTGAAGCAAAATCGTCTTTCAAGACAGCAAGTGGACGATGTTTCATTTTCGCATTCTCCAAATGAAACAATTGGTGGGACTGGTCATCGGAAAAATTATGAGCAGTTGAGTCCTCAAAAGGCAATATCATTACCTTCATCACCTATGCATGATTATAGGAGTCAGTCTCTGAGAAGTGGGCTATCACAATATGCAGTCAACACTGAATTGGTATCAACATGGAACAGGATCCTTGAATCTCCGATGTTCAACAACAGTCCTCTATTACCTTACCCAGAATGGAACATTGACTTCTCTGAATTGACTGTAGGAACTCGAGTTGGGATCGGGTTCTTCGGTGAAGTATTCCGTGGCATGTGGAATGGCACGGATGTAGCTATCAAAGTTTTCTTGGAGCAAGGTTTAACGGCTGAAAACATGGAAGAATTCTGTAATGAAATAACAATCCTCAGCCGACTCAGACATCCAAATGTTATTTTATTTCTTGGAGCGTGTACAAAACCTCCACGTCTATCAATGATTACCGAGTACATGGAGATGGGATCCTTGTATTATTTGATTCATTTGAGTGGTCAGAAGAAGAAGCTTAGTTGGCGAAAAAGGCTGAAGATGCTGCGTGATATATGCAGGGGATTGATGTGCCTGCATCGCATGAAGATAGTTCACCGGGATCTGAAGACCGCAAATTGCCTAGTGAATAAGCATTGGACTGTCAAGATTTGCGATTTTGGGCTTTCAAGAATGATTACAGACTCTCCCATAAGAGATTCTTCATCAGCTGGGACGCCCGAATGGATGGCTCCTGAACTCATTCGAAAAGAACCTTTTACTGAAAAATGCGACATTTTTAGCCTTGGGGTGATAATATGGGAGCTCTGCACTTTAAATAAACCATGGGATGGTGTACCACCAGAAAGGGTGGTCTATGCTGTTGGCAATGAGGGGTCACGTCTAGAGATTCCAGAAGGTCCGTTGAGCAGATTAATATCAGATTGTTGGGCAGAACCGCCCGAGCGGCCAAGTTGTGATGAGATTCTGTCTAGGTTGGTTGACTGCGAGTATTCGCTATGCTGA 2382 0.4307 MEELQEDSVPAEQGPSNALWWTSNFEEKFRTVSLGSPGGTLSNRGSPRNTEQTVLSGQKASQILWNTGTLSEQIPSGFYSVIAEKRLKELFDGLPSMDELQSLGAEGFKADVILVDFEKDKKLSMLKQLIVTLVKGLNSNPAAMIKKTADLVSDVYKRPIESPAKSVVEESSNMFEPRGVQMLGQIKHGSCHPRAILFKVLADSVGLESSLAVGLPNDGTVECPDSYKHVSVIVVLNSVEMLVDLMRFPGQLLPRSTKAILMTHISAAGESDSAENDSCDSPLEPNSPLYSLPDRMDPDSMEKDEHLQFHKRFETSSSLRNMMLRSGTALDRKMSLSHSEPNIATTFWQRSRQKVIAEQRTACSSPEHPSFRVRGPSMLSGDRKSFRGFADDVATSRYRSEGASSSDTRRMRRRSISITPEIGDDIVRAVRAMNETLKQNRLSRQQVDDVSFSHSPNETIGGTGHRKNYEQLSPQKAISLPSSPMHDYRSQSLRSGLSQYAVNTELVSTWNRILESPMFNNSPLLPYPEWNIDFSELTVGTRVGIGFFGEVFRGMWNGTDVAIKVFLEQGLTAENMEEFCNEITILSRLRHPNVILFLGACTKPPRLSMITEYMEMGSLYYLIHLSGQKKKLSWRKRLKMLRDICRGLMCLHRMKIVHRDLKTANCLVNKHWTVKICDFGLSRMITDSPIRDSSSAGTPEWMAPELIRKEPFTEKCDIFSLGVIIWELCTLNKPWDGVPPERVVYAVGNEGSRLEIPEGPLSRLISDCWAEPPERPSCDEILSRLVDCEYSLC* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01375 793 SUPERFAMILY Protein kinase-like (PK-like) 511 785 IPR011009 -
Pte1g01375 793 FunFam Serine/threonine-protein kinase isoform 1 528 615 - -
Pte1g01375 793 CDD STKc_MAP3K-like 543 785 - -
Pte1g01375 793 Pfam Ethylene-responsive protein kinase Le-CTR1 58 252 - -
Pte1g01375 793 ProSitePatterns Protein kinases ATP-binding region signature. 543 564 IPR017441 GO:0005524
Pte1g01375 793 Gene3D Transferase(Phosphotransferase) domain 1 616 791 - -
Pte1g01375 793 ProSiteProfiles Protein kinase domain profile. 537 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01375 793 Gene3D Phosphorylase Kinase; domain 1 530 615 - -
Pte1g01375 793 MobiDBLite consensus disorder prediction 271 290 - -
Pte1g01375 793 MobiDBLite consensus disorder prediction 271 285 - -
Pte1g01375 793 SMART serkin_6 537 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01375 793 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 287 785 - -
Pte1g01375 793 MobiDBLite consensus disorder prediction 441 468 - -
Pte1g01375 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Pte1g01375 793 Pfam Protein tyrosine and serine/threonine kinase 538 785 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01375 Pte-Chr1 35285678 35299031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01375 1 794 MAP Kinase Kinase Kinase AT3G58640 66.951 0.0 1114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Pte1g01375 PK_Tyr_Ser-Thr 1.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01375 - - pvy:116114020 1258.82