Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01360 ATGATCAAAATACTTTCAAGGAGAAGGCCTGGACAGCTCATCAAAACCATTGCTGCACTTGAGGACTTGCAGCTTAATATTCTTCATACCAACATCACCACGATTGAACAAACAGTTCTTTACTCATTCAATGTCAAAGTAGCAAGTGATTCAAGGTTCACAGCTGAAGACATAGCAACTTCTGTTCAACAGATATTCAGTTTTATACATGCAAACAATGGCATGTGA 228 0.3816 MIKILSRRRPGQLIKTIAALEDLQLNILHTNITTIEQTVLYSFNVKVASDSRFTAEDIATSVQQIFSFIHANNGM* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01360 75 PANTHER TRANSCRIPTION FACTOR FAMA 1 66 IPR044283 GO:0003700|GO:0010052
Pte1g01360 75 SUPERFAMILY ACT-like 2 63 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01360 Pte-Chr1 35102193 35102554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01360 1 76 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 85.526 1.16e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01360 K26213 - csv:101214530 136.732