Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01358 ATGTACTCTGCTATTCATTCACTTCCGCTTGATGGGAAAATCGGGCATGGCGATTTTCAAGGACCTTTGGATGGTACCAACTTGCCAGGTGATGCTTGTTTAGTGTTGACTACGGATCCTAAGCCTCGTCTTCGTTGGACTGCTGAACTCCATGAGAGGTTTATCGATGCTGTCACTCAGCTTGGTGGCCCTGACAAAGCAACACCTAAAACTATACTGAGAACAATGGGGGTGAAAGGGCTGACTCTTTATCACTTGAAATCACATCTTCAGAAATACCGATTAGGGAAACAGTCAGGCAAGGAATCGACTGAACTGTCCAAGGATGGTGTTTCTTGCATCGCGGAAAGTCAGGACAGTGGGTCATCGGCATTGTCATCACCAAGAATAATAGCTCAAGATCTGAATGATGGCTTCCAAGTTACTGAGGCTTTAAGAGTACAAATGGAAGTCCAGAGAAGACTGCACGAGCAGCTAGAGGTGCAACGCCGTCTCCAACTTCGAATCGAAGCACAAGGAAAGTACCTGCATGCCATTCTTGAAAAAGCTTGTAAAGCTCTCAGTGATCAATCTGGAATGTCAGCCGGGCTTGAAATGGCTAGGGAAGAACTTTCTGAGCTTGCTATCAAGGTTTCTGATGACTACCAAAGAACACCATTTGAGATCTCAAACGTGCCTGCCTTATCCAATGCTGCTGGAGCTTTAGAAATCAAGGATACTTCAAATGTGCCTGCCCATTTTAGCGAGTGCTCAATTGAAAGCTGCTTGACCTCAGCTGGAACCCACATATCTCCATTGGGAATGGCTTCCCTGGCAGCTTCTGCCAAGAAGAGACCAAGGCCTATATATTCGACTATTGGAGCCTCTTTGCCAATGGATGGTAACATGATAACTGTAGAATGGGTGATGCCTAGTATTAGGTAA 924 0.4578 MYSAIHSLPLDGKIGHGDFQGPLDGTNLPGDACLVLTTDPKPRLRWTAELHERFIDAVTQLGGPDKATPKTILRTMGVKGLTLYHLKSHLQKYRLGKQSGKESTELSKDGVSCIAESQDSGSSALSSPRIIAQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRRLQLRIEAQGKYLHAILEKACKALSDQSGMSAGLEMAREELSELAIKVSDDYQRTPFEISNVPALSNAAGALEIKDTSNVPAHFSECSIESCLTSAGTHISPLGMASLAASAKKRPRPIYSTIGASLPMDGNMITVEWVMPSIR* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01358 307 Gene3D - 40 98 - -
Pte1g01358 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 98 IPR017930 -
Pte1g01358 307 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 24 261 IPR044848 GO:0003700
Pte1g01358 307 Pfam MYB-CC type transfactor, LHEQLE motif 140 186 IPR025756 -
Pte1g01358 307 SUPERFAMILY Homeodomain-like 40 97 IPR009057 -
Pte1g01358 307 FunFam Myb family transcription factor 40 98 - -
Pte1g01358 307 Pfam Myb-like DNA-binding domain 44 94 IPR001005 -
Pte1g01358 307 NCBIfam myb-like DNA-binding domain, SHAQKYF class 41 96 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01358 Pte-Chr1 35092377 35097625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01358 1 305 G2-like Transcription Factor Family AT3G24120 65.287 2.59e-130 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte1g01358 Myb_DNA-binding 9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01358 - - pvy:116124805 448.358