Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01351 ATGAGTTTCATGAAGATTGGTTTTCTAATTATAATGCTTCTACTTCTCAAGGGGGCTGTCTGTGCACGAAACTGGAAGAATGCAGAGGAAGAACTTCTCAACCAGCTGCGTGATCCAGCGTCTGGTTTACTTGACAAGGATAAGGGCTATGGTCAATGTCTTGAGCTTGTGCTTAAATTTCTGCCATTTCTGATCTCTAGAGAAGATATTGGATCCAAGATTATTCATGCTGGGTATTTGGAGTCCCTATTTTGCAGGACTGATGTTCACCGAAGAATCTTGGGCAGGGGTTTGCCTCAGAGTGTATCAACAATCCCTGGGTCCATGCCTGTACAAGCTCTTTCTGTAGGATCGCCTTCATTACCTGTGCAACCATCTCCTGATTCGGTCGAGTCTCCTGCTCCACAACATGCCATCTCTAGGCAACCTTCTGCTCGTCATCTTGCTGAATCTAATCAGAAGCCACCAGCCAAGAAAAAGTCAGATTCAAAAAAAGCAAAAAAGGATAATAACAGCAACTCAATTATCATTGCTGTTGCAGCGGTGGTGACAGTTGTTGTTGCGGCACTGCTGTTTATCTTTTGCTGTGGCTGTACAAAAGGTGCTCAGGATGGAGAACATGACGAGAAACCCTTACTTAGCTTGCGCTCGAGTGACTATTCTTTTGGTTCTTGTAAAGAAGGCAAAATTGATGGTTCTGAGGTACTCCATGCACAGGAAAGTCAGTTGGGAGGTGGTGTTGGTACTGAATCACTTCCTGCTTTGAAACCTCCCCCTGGGAGGGTGGTGGCAACACCATCTGGAGTAGGTCCACTGAAGCCGCCACCTGGGAGGCCTGATCTCCTTCCTCCAGAACCACCTTCTACTGTAAAAGATAACTCTATTCAAAATAATTCTGCTCCACCACCTCCTGCACCACCTCCCCCTTCAAAAGCTAATCACAAAGGCCCTCCACCTCCTGGACCTCCTCCACCCCCTGCACCACCTGGTGCGAGACCAGGTCCTCGCCCACCTCCACCTCCCAAGATAGGTGGTGGCCCCCCTCGACCACCACAACCAATGGCTACAAGATCAAAATCGGGTCAGCACACTGGCCGACCGAATGCTCCACCAAATCCTGCTTCAGAGAGTGATTCGGATGCTCCTAAAACCAAGTTAAAACCATTTTTCTGGGATAAGGTTCAGGCTAGTCCTGATCAAGCAATGGTTTGGAATCATATCAAAGCAGGATCATTTCAGTTTAATGAGGAAATGATAGAAAGTCTGTTTGGATATTCAGCTGCTGATAAAGGCAAAGTTGAGAAAAAGAAACCGCCTTCTGCTCAAGACTCTGCACCACAGATTATCCAGCTCATCAATCCAAAGAAAGCACAAAATTTATCAATTCTACTGAAAGCACTGAATGTGACAAATGAAGAAGTCTGTGATGCACTTCTTGAAGGAAATGAGCTCCCAGCTGAGTTCATTCAGACATTGATAAAGATGGCACCTACAGCAGATGAAGAACTTAAACTTAGGCTTTTCAATGGTGAAATATCCCAACTAGGACCAGCTGACCGCTTTCTAAAATCCTTAGTGGACATTCCTTTCGCCTTCAAACGTATGGAAGCATTGCTTTTTATGGGTACTCTTCAAGAAGAGCTTACCACTTGTAAGGAATCATTTGCAACCTTGGAGGTAGCTTGTAAGGAGTTGAGAAACAGCAGACTATTCCTTAAACTTCTGGAAGCTGTTCTTAAAACTGGTAACCGCATGAATGATGGCACTTACCGTGGCGGAGCTCAAGCATTTAAACTGGACACACTTCTGAAGTTATCTGATGTAAAAGGAATAGATGGCAAGACCACACTCCTAAATTTTGTGGTTAAGGAGGTAGTGCGCACTGAAGGTTTAAAAGCTCTTCGTATAGCAAGAGAGAGTGGTAGTTTCTCTAGTTTCAAATCAGAGGATCTTGTTGAGGATCCCACACAAGATTCAGAACAGGAATATCGAAGCATTGGCCTCCGGGTTGTTTCAGGGTTGAGTCATGAACTTGGGAATGTGAAGAAAGCGGCGGGTTTAGATGCAGACATCTTAACAGGAACTGTTGCCAAACTTGGCCATTCTCTTGTAAAAACTAAAGATTTCTTTAGTAAGGACGTGAAGACGTTAGGGGAAGACAATGGCTTCTATCAAATTCTACAAGCCTTTGTACAGAATGCTGAGGGTGAGGTCACAGCCATCCTTGAGGAAGAGAAGAGAATCATGGAGTTGGTGAGAAATACAGGTGACTATTTTCATGGCAAGGCTGGGAAGGATGAGGGGTTGCGCTTATTCTCCATTGTCCGCGACTTCTTGATAATGATAGATAAGGTGTGCAAGGAGATTAGAGATGAACAGAATAAGAAGGCAACTAAAATGCATAAACATGAGACTGGCAGTGTCTCATCTTCCTCAGATCGGCAGCAACCTTCTGATCTTAACAACCGATTGTTTCCTGCAATCAGAGACAGGGGACAAGATAATTCGAGTTCAGATGATGAAAGCTAA 2529 0.4472 MSFMKIGFLIIMLLLLKGAVCARNWKNAEEELLNQLRDPASGLLDKDKGYGQCLELVLKFLPFLISREDIGSKIIHAGYLESLFCRTDVHRRILGRGLPQSVSTIPGSMPVQALSVGSPSLPVQPSPDSVESPAPQHAISRQPSARHLAESNQKPPAKKKSDSKKAKKDNNSNSIIIAVAAVVTVVVAALLFIFCCGCTKGAQDGEHDEKPLLSLRSSDYSFGSCKEGKIDGSEVLHAQESQLGGGVGTESLPALKPPPGRVVATPSGVGPLKPPPGRPDLLPPEPPSTVKDNSIQNNSAPPPPAPPPPSKANHKGPPPPGPPPPPAPPGARPGPRPPPPPKIGGGPPRPPQPMATRSKSGQHTGRPNAPPNPASESDSDAPKTKLKPFFWDKVQASPDQAMVWNHIKAGSFQFNEEMIESLFGYSAADKGKVEKKKPPSAQDSAPQIIQLINPKKAQNLSILLKALNVTNEEVCDALLEGNELPAEFIQTLIKMAPTADEELKLRLFNGEISQLGPADRFLKSLVDIPFAFKRMEALLFMGTLQEELTTCKESFATLEVACKELRNSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGIDGKTTLLNFVVKEVVRTEGLKALRIARESGSFSSFKSEDLVEDPTQDSEQEYRSIGLRVVSGLSHELGNVKKAAGLDADILTGTVAKLGHSLVKTKDFFSKDVKTLGEDNGFYQILQAFVQNAEGEVTAILEEEKRIMELVRNTGDYFHGKAGKDEGLRLFSIVRDFLIMIDKVCKEIRDEQNKKATKMHKHETGSVSSSSDRQQPSDLNNRLFPAIRDRGQDNSSSDDES* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01351 842 Pfam Formin Homology 2 Domain 378 781 IPR015425 -
Pte1g01351 842 ProSiteProfiles Formin homology-2 (FH2) domain profile. 376 808 IPR015425 -
Pte1g01351 842 Gene3D Formin, FH2 domain 381 817 IPR042201 -
Pte1g01351 842 MobiDBLite consensus disorder prediction 116 149 - -
Pte1g01351 842 MobiDBLite consensus disorder prediction 794 842 - -
Pte1g01351 842 MobiDBLite consensus disorder prediction 299 354 - -
Pte1g01351 842 MobiDBLite consensus disorder prediction 794 808 - -
Pte1g01351 842 SMART it6_source 376 797 IPR015425 -
Pte1g01351 842 MobiDBLite consensus disorder prediction 269 286 - -
Pte1g01351 842 MobiDBLite consensus disorder prediction 116 169 - -
Pte1g01351 842 PANTHER FORMIN-RELATED 97 839 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pte1g01351 842 MobiDBLite consensus disorder prediction 152 169 - -
Pte1g01351 842 SUPERFAMILY Formin homology 2 domain (FH2 domain) 389 800 - -
Pte1g01351 842 MobiDBLite consensus disorder prediction 355 379 - -
Pte1g01351 842 MobiDBLite consensus disorder prediction 244 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01351 Pte-Chr1 34990816 34995313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01351 367 834 FH2 protein (formin) Gene Family AT5G54650 67.516 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01351 - - jre:109014354 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01351 1 34990816 34995313 Pte1g01351 1 34990816 34995313 RCT