Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01349 ATGAAAGAGGAGTCCATAGGGCTAATCATTGGGATCTCTATTGGTGTGGTGATTGGAATTGGTTTAGCTGTATCTGCAATATTTTGCCATAAGTTCCACAGAAAACGTTCACAGATAGGTAATAGCAGTTCTAGGAGAGCAGCTACCATACCCATTCGCACAAATGGTGTCGATTCTTGTACCATACTGTCAGACTCAACAATAGGTCCTGAATCACCTGTAAAGTCTGGAAGAAATGGTGGGTCTTGGTTTCATGGGTTGAAGAAGAACAGCATTGTTTCAGCGTCTGGGATACATGAGTATTCATTTAAGGATTTGCAAAAGGCAACATACAATTTTACAACATTGATTGGTCAAGGTGCATTTGGTCCTGTGTACAGAGCTCTGATGTCAGCTGGTGAAACTGTAGCTGTTAAAGTTCTATCCACTGATTCGAAGCAAGGGGAGAAAGAATTTCAAACGGAGGTGATGCTATTGGGAAGGTTACATCATAGGAATCTTGTGAATCTGGTAGGATACTGTGCAGAGAAAGGGCAGAACATGCTTGTGTATGTCTACATGAGTAAAGGCAGCCTGGCTTCTCATCTATACAATCCTGTGAATGAGCCGTTGACTTGGGATTGGAGGGTTCAGATAGCTTTGGATGTAGCAAGGGGCTTGGAGTATCTTCATGACGGGGCCATTCCTCCTGTAATTCACCGTGACATAAAATCTTCCAACATATTGTTGGATGAGTCAATGCGAGCTCGGGTTGCTGACTTCGGGCTTTCAAGGGAGGAAATGGTGGATAAGCATGCAGATAATATAAGGGGTACCTTCGGCTATCTTGATCCCGAGTACATATCCACTCGATCGTTCACGAAGAAGAGTGATGTGTACAGCTATGGAGTGTTGCTGTTTGAACTAATAGCTGGCAGAAATCCTCAGCAGGGTCTTTTGGAATATGTTGAGCTCGCAGCAATAAATGCTGAAGGGAAAGTTGGTTGGGAAGAACTTGTGGATTCTCGCCTTGATGGAAAGTTCGATATCCAAGAGCTCAACGAATTGGCTGCAATTGCGTTCAAATGCATCAACCGCTTCCCAAGGAAGCGGCCTTCCATGAGGGACATAGTGCAGGTTCTGACGCGAATTCTTAAACTGAAACGAAATAGAAGTCACCATAAAAAAACACTATCTGCCATGACAGACGAAGTTTCCATAAATATTGAGCTGCCAGATGCAAAAGCTGCAACCACAGAACATAGGAGAGAAGAATCTATTGACAGCACTTCAGATACTTACGAAGTGTAA 1290 0.4349 MKEESIGLIIGISIGVVIGIGLAVSAIFCHKFHRKRSQIGNSSSRRAATIPIRTNGVDSCTILSDSTIGPESPVKSGRNGGSWFHGLKKNSIVSASGIHEYSFKDLQKATYNFTTLIGQGAFGPVYRALMSAGETVAVKVLSTDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQNMLVYVYMSKGSLASHLYNPVNEPLTWDWRVQIALDVARGLEYLHDGAIPPVIHRDIKSSNILLDESMRARVADFGLSREEMVDKHADNIRGTFGYLDPEYISTRSFTKKSDVYSYGVLLFELIAGRNPQQGLLEYVELAAINAEGKVGWEELVDSRLDGKFDIQELNELAAIAFKCINRFPRKRPSMRDIVQVLTRILKLKRNRSHHKKTLSAMTDEVSINIELPDAKAATTEHRREESIDSTSDTYEV* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01349 429 Gene3D Transferase(Phosphotransferase) domain 1 187 401 - -
Pte1g01349 429 Pfam Protein tyrosine and serine/threonine kinase 113 374 IPR001245 GO:0004672|GO:0006468
Pte1g01349 429 FunFam calcium/calmodulin-regulated receptor-like kinase 1 187 396 - -
Pte1g01349 429 Gene3D Phosphorylase Kinase; domain 1 83 186 - -
Pte1g01349 429 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 85 186 - -
Pte1g01349 429 PANTHER OS01G0750732 PROTEIN 4 393 - -
Pte1g01349 429 CDD STKc_IRAK 117 377 - -
Pte1g01349 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Pte1g01349 429 MobiDBLite consensus disorder prediction 408 423 - -
Pte1g01349 429 SUPERFAMILY Protein kinase-like (PK-like) 101 388 IPR011009 -
Pte1g01349 429 MobiDBLite consensus disorder prediction 408 429 - -
Pte1g01349 429 ProSiteProfiles Protein kinase domain profile. 111 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01349 429 SMART serkin_6 111 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01349 Pte-Chr1 34980638 34985791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01349 24 374 Glycoside Hydrolase AT3G07070 39.295 3.11e-73 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pte1g01349 PK_Tyr_Ser-Thr 1.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01349 - - mnt:21404023 686.026