Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01345 ATGGCAGATGATCAATTTTCAGCAAGTGGAAACTGGTGGGATTCAGGGAGGAATAGGTATGATAATGGGGCATCACAGTCTTCCTCCTCAGGACTTACTACTATGGCAAACTTTGCTTGGCAACCAGCTGATATGGTGGACACCAAGCCAAGGTCATCCATGGGTTCCATGTCTATGTCTGATAATTCATCTATGGTGTTTCACGACAACCAGAAACCTCAAACTTCTGATTCTGCTGCTTCCTCCGATCCCAACTTGCACATGATGGCTTTAGGTCTTTCTAATCAACCTTTGGATTGGAACCAACCACCATTACTCCATGGTGAGAAGTCGGCACCAGCGAGCAGTTTCCGGTCGATGCTCCAAGATAAGCTGAATACAAACCCAAATTTTCGACAAGAAACTGGGATCGCGTTATCTCAAGTTCAATGGAGAGAAAAATTGTTCTCTGGTGGATGCAATTCTGAGTCCTCCACCAATGAATTCAAGCAAGTTAACAGTGGTTTCTCTTTAGACCAACCTCACCAGTTTAGTCCTCAATATAGCTGCGGTGACAGAACTATTGTATGTCAAGGCCTACCCTCAACTTTTCAGGTGGACTCATCTGCTTTATATGGCAACCCATCGATACTACAAGGCCTACTGGGAACTGAAAGCAATCAAACACAGCAGCCTTCCATCAATATGCCCTACCCAGCAAGCTATGGATTCAATAATTCTTGTGACCTCGTGCCTTCTTGGTCCAAAGTTCCTCAATTTTTAAGGTCCTCGACACCTAAACAGCAAGCATCCCACAACCAGCTAAGCTTCACAGACAACACCCCTATTTGTAATACAGCTGAGATATTGAATAAGGATATCCGACCAAGCCATTTTCCTTCATCACAAACTCCATTTTCATCCCCAAGTTTTGATCTACGGTCCAAGAATATATCATCGAAAATGAGGGACTCAAATGTTTTTGTGAAGAAAAGTTTCAGTACTGAAACAGCATCTAAGAGGCCTCGAAGTGAAGCCCCATCTCCTATGCCAGGTTCCAAGGTGATCAGGAAAGAGAAGATGGGGGACAGAATCACTGGACTGCAACAATTGGTTTCACCTTTCGGAAAGACTGATACAGCTTCAGTGCTCTCTGAAGCCATTGAGTACATAAAATTCCTCCATGAGCAAGTGACTTTACTGATCTCTCCGTATATGAAAAGTGGAGGTTCCATGCAACATCAACAGCAGGTACGCAATATCATAACCTAA 1251 0.438 MADDQFSASGNWWDSGRNRYDNGASQSSSSGLTTMANFAWQPADMVDTKPRSSMGSMSMSDNSSMVFHDNQKPQTSDSAASSDPNLHMMALGLSNQPLDWNQPPLLHGEKSAPASSFRSMLQDKLNTNPNFRQETGIALSQVQWREKLFSGGCNSESSTNEFKQVNSGFSLDQPHQFSPQYSCGDRTIVCQGLPSTFQVDSSALYGNPSILQGLLGTESNQTQQPSINMPYPASYGFNNSCDLVPSWSKVPQFLRSSTPKQQASHNQLSFTDNTPICNTAEILNKDIRPSHFPSSQTPFSSPSFDLRSKNISSKMRDSNVFVKKSFSTETASKRPRSEAPSPMPGSKVIRKEKMGDRITGLQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTLLISPYMKSGGSMQHQQQVRNIIT* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01345 416 MobiDBLite consensus disorder prediction 326 348 - -
Pte1g01345 416 MobiDBLite consensus disorder prediction 46 85 - -
Pte1g01345 416 MobiDBLite consensus disorder prediction 1 31 - -
Pte1g01345 416 MobiDBLite consensus disorder prediction 51 83 - -
Pte1g01345 416 FunFam Transcription factor bHLH123 family 347 410 - -
Pte1g01345 416 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 338 387 IPR011598 GO:0046983
Pte1g01345 416 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 350 401 IPR036638 GO:0046983
Pte1g01345 416 CDD bHLH_AtbHLH_like 350 394 IPR045239 -
Pte1g01345 416 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 106 409 - -
Pte1g01345 416 Gene3D - 349 414 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01345 Pte-Chr1 34886686 34890059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01345 111 409 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 40.395 8.64e-37 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01345 - - qsu:112024716 440.654