Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01343 ATGTCAATCTTCACCTTAGCTCATCTGCTAGTGTTTACTTCTCTCAAATTGTTCACAGCAGTTGAATCCATTTCTCGGTCTCACTTTTTCAGTGATCATGGCTTCACTTCGGGTTCTAAGCAAGAAAAATTTAAACTGGGTTTTTTAAGAACAGACGATAACCCACTTTCTCATAATGACATGTATATAGGTACATACATGAGAAAGTACCTTCAAGTGGATAACCTACAACCTAGTCCTTCACCAGGATTAAGTCCCAGTTCTGTTTCTCATATATGTGATACTCATGGTCTCTGCGGAGTATATGGGGTCTGTAATGCTAGTAAGTCACCAGTTTGCGAATGCTTGCAAGGATTTCGGCCAAAGTCCCAACAGGAATGGAACTCAATGAATTGGACTCAAGGGTGCGTGAGAGATAAGGCTTTGAATTGTAATGCTAAAGACGGAGATAGCTTTATCAGCTTGTTGGACGTTAAATTACCAGATGGTACTCAAAGTTTTATTGACCAGAGCATTGGTTTACAGGAATGCAGACAGAATTGTATCAATAATTGTTCTTGCACGGCATACACGATAGTGACTCACAACGGTACAGGAGGAAATGGCGATTTTTTCCCATATGGCTGTGCCATGTGGTTTGTTGATCTCATTAACATTAAGCAATTGTCGAGCGGTGGGCAGAACCTGTTTGTTAGAATAGCAGCTTCGGAATTAGGTAACAAGCAAGGAAAAGGTGGGAGCAAGAAGATTGCTGCAGTTGTGAGTGTTACTGTCACTGCCACAGCTATTGCAGTTGCTTTAGTTGGCTGTTACTATTTCAAAAGGAGAAAACTCAAGCGAGGAGTACAGAAAACTAATGTAAAACAACAAAACAGTGACATGCAAGATCTGGACCTCCCACTTTTCAATCTAGTGACTATAATCACTGCCACAAACGACTTTGCAATGAGTAACAAGCTAGGAGAAGGTGGTTTTGGGCCCGTATATTGGGGCAAACTAGAGGATGGTCAAGAAATTGCTGTGAAGAGGCTATCGCAAAGCTCAGGACAGGGCTTGACGGAGTTCAAGAATGAAGTGAAACTGATTGCCAAACTTCAGCACCGCAATTTGGTTAGGCTTCTTGGTTGCTGCATTCAGGAAGAGGAAACAATGTTGGTATATGAATACATGCCCAACAAAGGCCTAGACTCCTTTCTTTTTGATGAAACTAAACGGAAACTGCTAGATTGGCCTAAGCGCTTTCAGATTATCTGTGGGATCGCTAGAGGTCTTCTTTATCTACATGAAGAATCCAGACTAAGAATTATCCACCGAGACCTCAAAGCTAGTAATGTTCTTCTAGACTATCAGTTTAACCCAAAAATTTCAGATTTTGGCTTGGCCAGAACTTTTGGTGGAGATCAGACAGAAGGGAACACACGAAGAATAGTTGGCACTTTTGGCTATATGGCTCCTGAGTATGCTATAGATGGGTTATTCTCGGTAAAATCTGATGTGTTTAGCTTCGGAATATTGTTGCTAGAAATCATAAGCGGCAAAAGAAATAAAGGATTTTACAATCCTAATCACTTCCAGAACCTAATTACTCATGCCTGGAAACTGAGGAAGGAAGGCAGAGCCTTAGAAATGATTGACCCCATTTTACAAGAAGAATCATGCAATCTTGGAGAAATTTTGCGCGTTATCCATGTCAGTCTTTTGTGTCTTCAAAGGCATCCAGAGGAGAGGCCCAGTATGTCATCGGCTGTTCTAATGTTGGGAAGTGATGTTGAAATGTCAGAACCTAAACAGCCTGGGTTTCTTATGGAAAGGAATCCATCTGAAGCTGAGTCGTCCTCAAGTAAGCAGAAAACAAGCTCGACCAACGACATTACCATTAGCCTTATAGAAGCTAGATAG 1899 0.4139 MSIFTLAHLLVFTSLKLFTAVESISRSHFFSDHGFTSGSKQEKFKLGFLRTDDNPLSHNDMYIGTYMRKYLQVDNLQPSPSPGLSPSSVSHICDTHGLCGVYGVCNASKSPVCECLQGFRPKSQQEWNSMNWTQGCVRDKALNCNAKDGDSFISLLDVKLPDGTQSFIDQSIGLQECRQNCINNCSCTAYTIVTHNGTGGNGDFFPYGCAMWFVDLINIKQLSSGGQNLFVRIAASELGNKQGKGGSKKIAAVVSVTVTATAIAVALVGCYYFKRRKLKRGVQKTNVKQQNSDMQDLDLPLFNLVTIITATNDFAMSNKLGEGGFGPVYWGKLEDGQEIAVKRLSQSSGQGLTEFKNEVKLIAKLQHRNLVRLLGCCIQEEETMLVYEYMPNKGLDSFLFDETKRKLLDWPKRFQIICGIARGLLYLHEESRLRIIHRDLKASNVLLDYQFNPKISDFGLARTFGGDQTEGNTRRIVGTFGYMAPEYAIDGLFSVKSDVFSFGILLLEIISGKRNKGFYNPNHFQNLITHAWKLRKEGRALEMIDPILQEESCNLGEILRVIHVSLLCLQRHPEERPSMSSAVLMLGSDVEMSEPKQPGFLMERNPSEAESSSSKQKTSSTNDITISLIEAR* 633
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01343 632 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 390 594 - -
Pte1g01343 632 CDD PAN_AP_plant 142 234 - -
Pte1g01343 632 Pfam PAN-like domain 144 219 IPR003609 -
Pte1g01343 632 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 94 612 - -
Pte1g01343 632 Gene3D Phosphorylase Kinase; domain 1 273 389 - -
Pte1g01343 632 SMART ntp_6 147 233 IPR003609 -
Pte1g01343 632 ProSiteProfiles PAN/Apple domain profile. 144 234 IPR003609 -
Pte1g01343 632 Pfam Protein tyrosine and serine/threonine kinase 316 581 IPR001245 GO:0004672|GO:0006468
Pte1g01343 632 SMART serkin_6 314 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01343 632 Gene3D Transferase(Phosphotransferase) domain 1 390 598 - -
Pte1g01343 632 ProSiteProfiles Protein kinase domain profile. 314 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01343 632 SUPERFAMILY Protein kinase-like (PK-like) 291 586 IPR011009 -
Pte1g01343 632 Pfam Domain of unknown function (DUF3403) 590 632 IPR021820 GO:0004674
Pte1g01343 632 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 279 389 - -
Pte1g01343 632 MobiDBLite consensus disorder prediction 594 632 - -
Pte1g01343 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Pte1g01343 632 MobiDBLite consensus disorder prediction 606 632 - -
Pte1g01343 632 CDD STKc_IRAK 320 586 - -
Pte1g01343 632 Pfam S-locus glycoprotein domain 87 123 IPR000858 GO:0048544
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pte1g01343 Pte-Chr1 34875222 34878702 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01343 265 633 Receptor kinase-like Gene Family AT4G23140 52.493 1.96e-129 394
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte1g01343 PK_Tyr_Ser-Thr 1.4e-49 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01343 - - pvy:116139824 657.521