Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01342 ATGCCCAACAAAAGCTTGAACTTATTTCTTTTCGATGAAGCAAGGGGTAAAATACTGAATTGGTCTAAGCGGTTCCATATCATATGTGGGATTGCAAGGGGTCTTCTCTATCTTCACGAAGATTCAAGACTTCGCATCATTCATAGAGATCTCAAAGCCAGCAATATTTTGCTTGATAATGAGATGAATCCAAAAATCTCAGACTTCGGTTTGGCCAGAAGTTTTTGTGGGGAAGACAATTCAAGAAACACGAATAGAGTGGTTGGGACTCATGGTTATATGGCACCAGAATATGCAATCCATGGACACTTCTCAGTAAAATCTGACGTGTTTAGCTTTGGTGTTCTGGTGCTAGAGATAGTGAGTGGAAAGAAAAGCAGAGGGCTTTATGGTCGAGGAAACGGCCTCAACCTCGTTGCACATGCATGGGACTTGTGGAAAGAAGGGAAACTTTCAGAGTTGGTTGATGAAGGCATTGTTGGGGAGAGGTGCAGTATTTCTGAAGTACTTCGTTGCATCCACATAAGTCTCTTATGTCTGCAGGAGAATCCTGAGGAGAGGCCAACCATGTCGTCAGTGCTTTTCATTTTAGATTGCAAGAGTTCGAGTTCCTTGCCTCAGCCAAGAGAACCATGTTTCTTCTTGAGAGAACACTCGGATGATGGCAATGCTTGTTCTTATAATTCACCATCGATCAATGATTTAACTGTTACTACAATTGAACCTCAATAA 732 0.4194 MPNKSLNLFLFDEARGKILNWSKRFHIICGIARGLLYLHEDSRLRIIHRDLKASNILLDNEMNPKISDFGLARSFCGEDNSRNTNRVVGTHGYMAPEYAIHGHFSVKSDVFSFGVLVLEIVSGKKSRGLYGRGNGLNLVAHAWDLWKEGKLSELVDEGIVGERCSISEVLRCIHISLLCLQENPEERPTMSSVLFILDCKSSSSLPQPREPCFFLREHSDDGNACSYNSPSINDLTVTTIEPQ* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01342 243 SUPERFAMILY Protein kinase-like (PK-like) 1 197 IPR011009 -
Pte1g01342 243 Pfam Protein tyrosine and serine/threonine kinase 3 194 IPR001245 GO:0004672|GO:0006468
Pte1g01342 243 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01342 243 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 241 - -
Pte1g01342 243 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 205 - -
Pte1g01342 243 SMART serkin_6 3 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01342 243 Gene3D Transferase(Phosphotransferase) domain 1 1 207 - -
Pte1g01342 243 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01342 Pte-Chr1 34855666 34856726 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01342 1 213 Receptor kinase-like Gene Family AT4G23230 60.094 4.72e-88 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte1g01342 PK_Tyr_Ser-Thr 9.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01342 - - qsa:O6P43_028994 321.627