Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01340 ATGGCACCAGAATATGCAATCCATGGACACTTCTCAGTAAAATCTGACGTGTTTAGCTTTGGTGTTCTGGTGCTAGAGATAGTGAGTGGAAAGAAAAGCAGAGGGCTTTATGGTCGAGGAAACGGCCTCAACCTCGTTGCACATGCATGGGACTTGTGGAAAGAAGGGAAACTTTCAGAGTTGGTTGATGAAGGCATTGTTGGGGAGAGGTGCAGTATTTCTGAAGTACTTCGTTGCATCCACATAAGTCTCTTATGTCTGCAGGAGAATCCTGAGGAGAGGCCAACCATGTCGTCAGTGCTTTTCATTTTAGATTGCAAGAGTTCGAGTTCCTTGCCTCAGCCAAGAGAACCATGTTTCTTCTTGAGAGAACACTCGGATGATGGCAATACTTGTTCTTATAATTCACCATCGATCAATGATTCAACTGTTACTACAATTGAACCTCAATAA 453 0.4349 MAPEYAIHGHFSVKSDVFSFGVLVLEIVSGKKSRGLYGRGNGLNLVAHAWDLWKEGKLSELVDEGIVGERCSISEVLRCIHISLLCLQENPEERPTMSSVLFILDCKSSSSLPQPREPCFFLREHSDDGNTCSYNSPSINDSTVTTIEPQ* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01340 150 Pfam Protein tyrosine and serine/threonine kinase 1 101 IPR001245 GO:0004672|GO:0006468
Pte1g01340 150 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01340 150 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 146 - -
Pte1g01340 150 Gene3D Transferase(Phosphotransferase) domain 1 1 114 - -
Pte1g01340 150 SUPERFAMILY Protein kinase-like (PK-like) 1 104 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01340 Pte-Chr1 34844909 34845481 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01340 1 151 Receptor kinase-like Gene Family AT4G23140 46.203 2.42e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte1g01340 PK_Tyr_Ser-Thr 1.7e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01340 - - qsa:O6P43_028994 168.318