Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01339 ATGGCTATCGTTTGTTCTCCTACCTTAACATTCAGCCTATGGTTACTCGTGTCTTATTTCAGAACTTCGTTTGCAGCAGATACTCTCACTTTTTCACAGCCCCTGATTGATGGAATGACTATAGACTCCAAAAGTGGAACTTTTCAGTTGGGATTCTTCACTCCGAAGCAAAACAGCAACCGCTACTTAGGGATATGGTACAAGAATATCTCAATTCAAACAGTTGTCTGGGTAGCTAACAGGGAAGCACCAATTAAAAACTTCTCTGCATCATTGCACATGAACAGTACTATAGGCAAGGTTTTGCTTGTTAGCGAGAAAAATACTGTACTATGGTCTGCAATTCCACGTAGAACTGCTCACAATTCAGTTTTGCAACTCCTAGATAATGGAAATCTCGTACTGCGCGAACATAATGACAGCAATCCAGAGAACTACCTGTGGCAGAGTTTTGACCATCCCTCTGATACTATGCTACCCTTAATGGAGATTGGTAAAGACTTCAAAACTGGTGTTGATCGACGTCTCACAGCATGGAAGAGTCCAAACGACCCGTCCCTGGGCAACCTCACTATGGGTTTCGACACATTGGGTTTGCACATCGTTAACTTCCCCGAGTCTGTTTTGTGGTTAGGCCCTCTCATACATTATAGGACTGGCCCTTGGAATGGAGTGGATTTCAGTGGCAGACCGTTTGAATGGAGCAATCAGATTGAGAGTCTTTCCGTAGACAACAACAACAGGTCGTCCTTCTTCTACAATTTTACACAACCATTTCTCGTAAGGGCAATAATAAATGAAACAAGTCTTGAAATAGAAAAGTATTTGTGGTCAGAAGCAGAGAATAACTGGATGTTACTTTGGAATTTTCCTAAAGACATCTGCGATATTTATAGTCTATGTGGACCTAATGGATTTTGTGATTTTTATAAATCCCCCGCCTGTCTTTGTCTGAATGGATTCAAGCCCAAGTCACCGGAAAACTGGAAGGCCACGAACTATTCAGAAGGTTGTATACGTGACTTACCATTGTCCTGCCAGAATGACGAGTTTCTTAAACTCCAAGGTTTTAAATTGCCTGACACTAGTTTTGGATGGCTGGACAGAAATATGTCTCTGAAGGAATGCAGAGAAAAATGTATGAGCAATTGTTCTTGTACGGCTTTTGCAAATTCTGATATTAGAGGAGGAGGCAGTGGCTGCATCATATGGCTTGGTGATCTAATTGATACAAGGGCAGAACCAGATGGTAGACAGGATCTATATGTACGAGTTCCTACTTCTGCGCCAGAGAGGAGACGTCCTGATACGAAGAAAGTAGCTGTGATAGTTGGAATCGTCTCTGCTGTAATTTGTGGATTTCTCATGGTAGGCTTTGGCATAAGGAGGAGAAGAATGAAGCGTAAAGACATCTCAGATAGTATGAAAACTCAAAATGCAAATAGAAGCAAACAGAATGATCTAGACCTCCCATTGTTTGAATTGTCGAAGCTTGCTACTGCAACTGGTAATTTTTCACTCGACAATAAGATTGGAGAAGGTGGTTTTGGAGCTGTATTCCAGGGAACATTAACAGATGGTCTCCAAATTGCAGTTAAGAGATTATCAAGTAGTTCCAAACAAGGAATAGATGAATTCAAAAATGAAGTAGGGCTTATAGCTAAACTTCAGCACCGTAATCTTGTCAAGCTTCTTGGATGCTGCACCCAAGATGAAGAGAAGTTACTGATATATGAGTTCATGCCCAACAAAAGCTTGAACTTATTTCTTTTCGATGAAGCAAGGGGTAAAATACTGAATTGGTCTAAGCGGTTCCATATCATATGTGGGATTGCAAGGGGTCTTCTCTATCTTCACGAAGATTCAAGACTTCGCATCATTCATAGAGATCTCAAAGCCAGCAATATTTTGCTTGATAATGAGATGAATCCAAAAATCTCAGACTTCGGTTTGGCCAGAAGTTTTTGTGGGGAAGACAATTCAAGAAACACGAATAGAGTGGTTGGGACTCAGTAA 2016 0.4107 MAIVCSPTLTFSLWLLVSYFRTSFAADTLTFSQPLIDGMTIDSKSGTFQLGFFTPKQNSNRYLGIWYKNISIQTVVWVANREAPIKNFSASLHMNSTIGKVLLVSEKNTVLWSAIPRRTAHNSVLQLLDNGNLVLREHNDSNPENYLWQSFDHPSDTMLPLMEIGKDFKTGVDRRLTAWKSPNDPSLGNLTMGFDTLGLHIVNFPESVLWLGPLIHYRTGPWNGVDFSGRPFEWSNQIESLSVDNNNRSSFFYNFTQPFLVRAIINETSLEIEKYLWSEAENNWMLLWNFPKDICDIYSLCGPNGFCDFYKSPACLCLNGFKPKSPENWKATNYSEGCIRDLPLSCQNDEFLKLQGFKLPDTSFGWLDRNMSLKECREKCMSNCSCTAFANSDIRGGGSGCIIWLGDLIDTRAEPDGRQDLYVRVPTSAPERRRPDTKKVAVIVGIVSAVICGFLMVGFGIRRRRMKRKDISDSMKTQNANRSKQNDLDLPLFELSKLATATGNFSLDNKIGEGGFGAVFQGTLTDGLQIAVKRLSSSSKQGIDEFKNEVGLIAKLQHRNLVKLLGCCTQDEEKLLIYEFMPNKSLNLFLFDEARGKILNWSKRFHIICGIARGLLYLHEDSRLRIIHRDLKASNILLDNEMNPKISDFGLARSFCGEDNSRNTNRVVGTQ* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01339 671 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 469 580 - -
Pte1g01339 671 SMART serkin_6 505 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01339 671 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Pte1g01339 671 CDD PAN_AP_plant 343 426 - -
Pte1g01339 671 SMART blect_4 32 154 IPR001480 -
Pte1g01339 671 SUPERFAMILY Protein kinase-like (PK-like) 487 670 IPR011009 -
Pte1g01339 671 CDD B_lectin 32 154 IPR001480 -
Pte1g01339 671 ProSiteProfiles Bulb-type lectin domain profile. 26 148 IPR001480 -
Pte1g01339 671 Pfam S-locus glycoprotein domain 217 325 IPR000858 GO:0048544
Pte1g01339 671 Gene3D Transferase(Phosphotransferase) domain 1 581 671 - -
Pte1g01339 671 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 151 - -
Pte1g01339 671 ProSiteProfiles PAN/Apple domain profile. 346 426 IPR003609 -
Pte1g01339 671 SMART ntp_6 346 425 IPR003609 -
Pte1g01339 671 Gene3D Phosphorylase Kinase; domain 1 465 580 - -
Pte1g01339 671 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 581 671 - -
Pte1g01339 671 Gene3D - 21 151 IPR036426 -
Pte1g01339 671 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 659 - -
Pte1g01339 671 Pfam PAN-like domain 346 411 IPR003609 -
Pte1g01339 671 ProSiteProfiles Protein kinase domain profile. 505 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01339 671 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 185 IPR036426 -
Pte1g01339 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Pte1g01339 671 Pfam D-mannose binding lectin 74 180 IPR001480 -
Pte1g01339 671 Pfam Protein tyrosine and serine/threonine kinase 506 663 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01339 Pte-Chr1 34842329 34844809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01339 440 670 Receptor kinase-like Gene Family AT4G23190 52.814 7.76e-72 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte1g01339 PK_Tyr_Ser-Thr 1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01339 - - qsa:O6P43_028998 758.444