Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01338 ATGGCTTTTGCAAATTCTGATATTAGAGAAGGAGGCAGTGGCTGCATCATATGGCTTGGTGATCTAATTGATACAAGGGCGGAACCAGATGGTAGACAGGATCTATATGTACGAGTTCCTACTTCTGAGTCCGAGAGGAGACGCCCTGAAACGAAGAAAGTAGCTGTGATAGTTGGAATCGTCTCGGCTGTAATTTGTGGATTTCTCATGGTAAGCTTTGGCATAAGGAGTAGTAGAATGAAGCGTACAGACGTCTCAGACATCTCAGATAGTATGAAAACTCAAAATGCAAATGAAAGGAAACGGAATGATCTAGACCTCCCATTGTTTGAATTGTCGAAGCTTGCTACTGCAACTGGTAATTTTTCACTCAACAATAAGATTGGAGAAGGTGGTTTTGGAGCTGTATTCCAGGGAACTTTAACAGATGGTCTGCAAATTGCAGTTAAGAGATTATCAAGTAGTTCCAAACAAGGAATAGATGAATTAAAAAATGAAGTAGGGCTTATAGCTAAACTTCAGCACCGTAATCTTGTCAAGCTTCTTGGATGCTGCACGCAAGATGAAGAGAAGTTACTGATATATGAGTTCATGCCCAACAAAAGCTTGAACTTATTTCTATTCGATTCAAGACTTCGCATCATTCATAGAGATCTCAAAGCCAGCAATATTTTGCTTGATAATGAGATGAATCCAAAAATCTCAGACTTCGATTTGGCCAGAAGTTTTTGTGGGGAAGACAATTCGAGAAACACGAATAGAGTGTTTGGGACTCATGGTTATATGGCACCAGAATATGCAATCCATGGACACTTCTCAGTAAAATCTGACGTGTTTAGCTTTGGTGTTCTGGTGCTGGAGATAGTGAGTGGAAAGAAAAGCAGAGGGCTTTATGGTCGAGGAAACGGCCTCAACCTCGTTGCACATGCATGGGACTTGTGGAAAGAAGGGAAACTTTCAGAGTTGGTTGATGAAGGCATCGTTGGGGAGAGCAGTATTTCTGAAGTACTTCGTTGCATCCACATAAGTCTCTTATGTCTGCAGGAAAATCCTGAGGAGAGGCCAACCATGTCGTCAGTGCTTTTCATTTTAGATTGCAAGAGTTCGAGTTCCTTGCCTCAGCCAAGAGAACCATGTTTCTTCTTGAGAGAACACTCGGATGATGGCAATACTTGTTCTTATAATTCACCATCGATCAATGATTCAACTGTTACTACAATTGAACCTCAATAA 1233 0.412 MAFANSDIREGGSGCIIWLGDLIDTRAEPDGRQDLYVRVPTSESERRRPETKKVAVIVGIVSAVICGFLMVSFGIRSSRMKRTDVSDISDSMKTQNANERKRNDLDLPLFELSKLATATGNFSLNNKIGEGGFGAVFQGTLTDGLQIAVKRLSSSSKQGIDELKNEVGLIAKLQHRNLVKLLGCCTQDEEKLLIYEFMPNKSLNLFLFDSRLRIIHRDLKASNILLDNEMNPKISDFDLARSFCGEDNSRNTNRVFGTHGYMAPEYAIHGHFSVKSDVFSFGVLVLEIVSGKKSRGLYGRGNGLNLVAHAWDLWKEGKLSELVDEGIVGESSISEVLRCIHISLLCLQENPEERPTMSSVLFILDCKSSSSLPQPREPCFFLREHSDDGNTCSYNSPSINDSTVTTIEPQ* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01338 410 Gene3D Phosphorylase Kinase; domain 1 82 197 - -
Pte1g01338 410 SUPERFAMILY Protein kinase-like (PK-like) 107 394 IPR011009 -
Pte1g01338 410 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 44 406 - -
Pte1g01338 410 Pfam PAN-like domain 2 25 IPR003609 -
Pte1g01338 410 ProSitePatterns Protein kinases ATP-binding region signature. 128 150 IPR017441 GO:0005524
Pte1g01338 410 ProSiteProfiles Protein kinase domain profile. 122 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01338 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Pte1g01338 410 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 86 197 - -
Pte1g01338 410 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 243 369 - -
Pte1g01338 410 Gene3D Transferase(Phosphotransferase) domain 1 204 374 - -
Pte1g01338 410 SMART serkin_6 122 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01338 410 Pfam Protein tyrosine and serine/threonine kinase 123 209 IPR001245 GO:0004672|GO:0006468
Pte1g01338 410 Pfam Protein tyrosine and serine/threonine kinase 213 361 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01338 Pte-Chr1 34769201 34771209 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01338 41 380 Receptor kinase-like Gene Family AT4G23230 46.070 4.00e-103 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte1g01338 PK_Tyr_Ser-Thr 4.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01338 - - qsa:O6P43_000897 451.055