Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01331 ATGAAGGGATACTGTAACTGCGAGCTTTGTGGGAAGAAGGCAAGGACGTACTGTGAATCAGACAAGGCAAAGTTATGTTGGGACTGTGACCAGAAAGTTCATGGTGCAAACTTTCTGGTAGCTAAGCACTCGAGGTGTCTTCTATGTCATGCCTGTCAATCTCCAACTGCATGGAAAGCTAGTGGATCTAAGCTCTTACCCACTGTTTCATTCTGTGAGGATTGTGTAGGTATTCAAAGGAAATCACGCGATCTCGATGACGAACTTGATAACCAGTACCAGCTTGACCATGCTGCTAGCGAAGATGATGATAACGATGACAGGGAGTACAGCTCTGCCAGTGACTATGAAGAAGATGAATATGATGATAGTTCGGAGGAGGAAGGAGACAACCAGGTTGTGCCATTCGCTCTGGATTCTGCTTCGTCTCCAGCACATGTGCTGAGTTGTAGCCATAGCGAAGAAGAAATTTCAAGCTTTGGGGGTGCAACAGGTGTTGTTAATATTTGTACCAGTGATTTACCATTTAAGCGGTTCAGGGAGAATTCATCCAACACAAACTTCTCTGATGATGAGATTGGAGGGTCCTCATTTCATAGTCAAACCCTATCTATGGCGTCACCCAACAGTGAAGTTTCTTCTGTCAGATACTTGAGACCACTGAAGCAGGCAAGAAGAAGTGAATTTTGA 690 0.4464 MKGYCNCELCGKKARTYCESDKAKLCWDCDQKVHGANFLVAKHSRCLLCHACQSPTAWKASGSKLLPTVSFCEDCVGIQRKSRDLDDELDNQYQLDHAASEDDDNDDREYSSASDYEEDEYDDSSEEEGDNQVVPFALDSASSPAHVLSCSHSEEEISSFGGATGVVNICTSDLPFKRFRENSSNTNFSDDEIGGSSFHSQTLSMASPNSEVSSVRYLRPLKQARRSEF* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01331 229 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 6 201 - -
Pte1g01331 229 MobiDBLite consensus disorder prediction 183 216 - -
Pte1g01331 229 MobiDBLite consensus disorder prediction 96 130 - -
Pte1g01331 229 ProSiteProfiles Zinc finger B-box type profile. 7 48 IPR000315 GO:0008270
Pte1g01331 229 SMART bboxneu5 2 48 IPR000315 GO:0008270
Pte1g01331 229 MobiDBLite consensus disorder prediction 183 217 - -
Pte1g01331 229 MobiDBLite consensus disorder prediction 102 129 - -
Pte1g01331 229 Pfam B-box zinc finger 6 46 IPR000315 GO:0008270
Pte1g01331 229 CDD Bbox1_BBX-like 7 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01331 Pte-Chr1 34671521 34672992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01331 7 103 C2C2-CO-like Transcription Factor Family AT4G27310 57.843 7.08e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte1g01331 zf-B_box 3.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01331 - - qsa:O6P43_029028 179.489