Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01313 ATGGAGAGTACTGATTCATCAACCAACCCACAACATCCTAACCTTCCACCTGGTTTTCGATTCCATCCCACCGACGAGGAACTAGTAGTTCACTACCTTAAGAGGAAGGCCTCTTCTGCTCCTCTGCCTGTTTCCATAATCGCCGATATTGATCTTTACAAGTTTGATCCATGGGAGCTACCAGCTAGGGCAAGCTTTGGAGAGCAAGAGTGGTATTTCTTCAGTCCTAGAGACAGGAAGTACCCAAATGGAGCGAGACCAAACCGGGCGGCCACCTCCGGTTACTGGAAGGCGACTGGAACTGATAAGCCGGTGTTATCCTCCGGTGGGACTCAAAAGGTTGGGGTTAAGAAAGCTTTGGTGTTTTATGGAGGAAAGCCACCTAAAGGAATAAAGACTAATTGGATCATGCATGAGTATAGGCTTGCTGATAACAAGACCAGCAACAAGCCCCCTGGTAGTGACTTGGGTAACAAGAAAAACTCTCTGAGGGTAACCCCTTCTTCTGCTCCGAACTTTCACGAATGA 528 0.4792 MESTDSSTNPQHPNLPPGFRFHPTDEELVVHYLKRKASSAPLPVSIIADIDLYKFDPWELPARASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLSSGGTQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLADNKTSNKPPGSDLGNKKNSLRVTPSSAPNFHE* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01313 175 MobiDBLite consensus disorder prediction 147 175 - -
Pte1g01313 175 MobiDBLite consensus disorder prediction 1 20 - -
Pte1g01313 175 SUPERFAMILY NAC domain 7 150 IPR036093 GO:0003677|GO:0006355
Pte1g01313 175 MobiDBLite consensus disorder prediction 144 175 - -
Pte1g01313 175 FunFam NAC transcription factor 56 24 168 - -
Pte1g01313 175 Gene3D NAC domain 24 166 IPR036093 GO:0003677|GO:0006355
Pte1g01313 175 ProSiteProfiles NAC domain profile. 15 168 IPR003441 GO:0003677|GO:0006355
Pte1g01313 175 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Pte1g01313 175 PANTHER NAC TRANSCRIPTION FACTOR 56 15 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01313 Pte-Chr1 34465872 34466534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01313 1 165 NAC Transcription Factor Family AT3G15510 81.437 1.31e-95 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte1g01313 NAM 3.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01313 - - tcc:18593864 329.331