Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01307 ATGATGTTATCAGCGTCACCCCCCTCGTTAGCGAGGAGTTCGTTGGAAGTAATGTTGGATGCGCTGCGTCGAAGAGATGAGGAAGAGAAACCAGAGGACTTGCCGCCAGCACTACCTACTAGACCTACTTCCAAAGCTCGTTTGCCATCGGCGAGAAGGTCGTTACCGAATAACTTCAAAGTTAGCGATGATGGTGACGGTGGCAGTGTTGTAAACAGGTGCTCAATTAGTGGTTGTGATGTTAAAGAGGATAGTAGCAAGAGGAAAGAGAAGGATTTAGGTTTTAACAGAAGTATTTTCGGAAGCAAAAAGATGAAGAAAGATGTGGAATCACCTTATGTTGTATTGACGCCAAAAGACAACAATGGTCGATCGGACCAACCAGTTTCAGCGACTTCTTTTCATGCGGCTTTATCAGGAAAAAATGGGGAGCTTGATCGGGATGATGATATTACTGATTTCATGAAAAGAAGACTTCATGTATGGTGTAAGCAATCAAATGGACTTTGGGGATTGGGAACAATACAGTCAACTTTAGGGGCGGAGGCCTCTGTTTCTCTCTCTAATTGCCATGTAATGAAGGTGCGGATGGGAGAGCTATTACCTGCCAACTCAGATATTCTCGAGGGCGTTGATGATCTCTTACAGCTTAGTTACTTGAATGAGCCTTCGGTCCTTCACAACCTTCGGTTTAGATATTCCCGGGATATGATTTATACCAAAGCAGGGCCTGTTTTAATAGCGTTGAATCCCTTCAAAGATCTTGACTTATACAGTAATGACAATATCTCAACATACAGACAGAATTTGGCGGAGAGTCCACATGTTTATGCAGTTGCAGATGCAGCCTATACTCAGATGTTGAGAGATGACGTTAATCAATCCATTATTATTAGTGGTGAAAGTGGGGCTGGGAAGACCGAAACAGCAAAGGTTGCAATGCAATATATTGCTACTCTTGGTGTTGGTAGTGGTGGGATTGAAAATGAAATCCTCCAGACAAGTTGTATCCTGGAAGCCTTTGGGAATGCAAAAACATCAAGGAATGATAACTCAAGCCGATTTGGGAAGTTGATTGAAATTCATTTCAACACACGGGGAAAGATATGTGGTGCCAAAATTGAAACCTTGTTCTTTGGGCAGTCTAGAGTAGTTCATCTGTGCAATGGTGAGAGATCATACCACATCTTTTATCAACTTTGTGCTGGCGCGACATCAATTCTTAAAGAGAGGCTGAACCTCAGAATGGCCAGTGAATATAAGTACCTTAGTCAAAGTGAGTGCATTAAAATTGGTGGCATTGATGATTCTGCAAATTTCGGCAGGCTCATGAAAGCCCTAAGTATCTTACGGATATGCAAAGATGATCAAGAGCATATATATGAGATTCTTGCAGCTATATTATGGTTGGGAAACATATCATTCCTTGTAGCTGACAAGGAAAATCATGTGGAGGTGACAGTTGATGAAGCTTTGATCAGCAGTGCAAAACTCATTGGCTGTGACTCTGAGGAGCTGAAATTAGCTTTATCCACTCGTAAAATTCAATGTGGCAAGGACATGATTTCTGTAAAACTGACACTACAACAGGCGGTTGACACAAGAGATGCTTTGGCCAAGTTTATGTATTTAAGTTTGTTCAACTGGCTTGTACAACGAATTAACAAGTCTCTGGAAGTGGATAAACAATTTAGAGGAAGATCCATATGCATTCTTGATTTATATGGCTTTGAGTCATTTCAGAGAAATAGCTTTGAACAATTTTGTATAAATTATGCGAATGAGAGGCTCCAACAACATTTCAATCGGCATCTCTTTACACTTGAGCAAGAGGACTATGAATTGGATGGAATTGATTGGATTAAAGTCAGTTTTGAAGATAATCAAGAATGCCTGGACCTTTTTGAGAAGAAAACTTTAGGCCTATTCTCTCTGCTGGATGAGGAATCTGATATGCCAAAGGCCACTGATTTGGCATTTGCTAATAAGCTTAAACAACACTTGAACGTTAATCCTCGCTTTAAAGGAGAAAGAGGCAGGGCTTTCAGTGTTCGTCATTATGCAGGAGAGGTTTTGTATGATACAAATGGGTTTCTTGAAAAGAACAGAGATTCATTGCACTCCGATTATTTTCAGCCCCTGTTATCATGTAATTGGCAGCTGCTGAAATTGGCCGCAACCAAAATGCTTTACCAGATGGGGACAAATGCTACACAAAACCGGAGTATCGGTGCAAAGTTCAAGGGTGAAGTCTTCAGATTAATGCATCAGCTGGATAACACAACTCCGCACTTTGTACGATGTATAAGGCCTAATACCAAGCGGCTTCCTGGGTTATACGACGAACAACTTGTCTTGCAACAGCTTAGGTGTTACGGAGTTCTGGAGGTTGTTAGGATTTCAAGATCTGGATATTCTACAAAAATGAGGCATCAAGATTTTGCTGGAAGGTATGGATTTTTACTCTCTGAGGGTAATGTATTGAAGGATCCTCTAAGCATTTCAGTTGCTATTCTGCAACAATTTCATATACAACCAGAGATGTACCAAGTGGGTTATACCAAAGTGTTTCTGCGGACAGGGCAGGTTGATATTTTTGAGACAAGAAGGAAACAAGTTATGCTTGGTGCACTCAATATTCAGAAACAATATCGTGGTTGCAAGGCTCGCCAGAATTTCCACTGTCTAAGGAATGTGGCAACAACATTGCAATCATTTGTTCGGGGAGAAATAATCAGAAAGAGATATAGTTTTGTGGTTACCAGTTCTTTGCCAGGTAGTTGGGGAACACTTGAGGAGCTCCAGGCAATCGTTAAACTACAATCTGTAATCCGAGGATGGATTGTTCGGTCACATGCGAAGAACATGCATAATGCTGGCAAAGCAAGTCCTGGAAATACAAAATCTAGGCAGAAGGAAAGTGGCAAAGTGCCAGAAGTGAAGGAAACTTCACATGAGCAGAATCTGCTTTCAGCTTTAGCAGTGCTCCAAAAACAAGTTCTAAACGCAGAATCAGCTCTGGTGAGAAAGGAAGAGGAAAATGCTGCACTGCGTGAGCAACTAAGACAGTCTGACAAGAGGTGGATTGATTATGAGATGAAGATGAAATCAATGGAGGAACTGTGGCAAAAACAGATGTCATCGCTGCAAATGAGTCTTGCTGCTGCAAAGAGGACCCTCGCCACTGATGACGCTGCTTTCCAACTGAGAAGGATTGATGTCTCATCACCTCGCCTGTATGATTCTGAGGATGTGGTTTCGATTGGATCTCGCACTCCTGGTGAAAGTACACATATCAAATTTTCTGATATTGGACGACGAGAAGCTAATGGTTCATTGAGAACTGTGAGCAATTTGGCAAAGGAATTTGAGCACTATAGACAGACATTTGACGATGAAGCCAAATTGCTAGTTGAGGTTAAATCAGCACAACCTGCTGACAATAATTCAGACGATGAACTTAGGAGACTTAAACTTAGATTTGAGACGTGGAAGAAAGAATACAAAGTTAGATTACGGGACACAAGGGCCAGGCTTCATAAACTAGGCAATTCAGAATGGGATAAAGGCCGCCGGAGGTGGTGGGGTAAGTTTAGCGCCAGGATATCATAG 3612 0.4175 MMLSASPPSLARSSLEVMLDALRRRDEEEKPEDLPPALPTRPTSKARLPSARRSLPNNFKVSDDGDGGSVVNRCSISGCDVKEDSSKRKEKDLGFNRSIFGSKKMKKDVESPYVVLTPKDNNGRSDQPVSATSFHAALSGKNGELDRDDDITDFMKRRLHVWCKQSNGLWGLGTIQSTLGAEASVSLSNCHVMKVRMGELLPANSDILEGVDDLLQLSYLNEPSVLHNLRFRYSRDMIYTKAGPVLIALNPFKDLDLYSNDNISTYRQNLAESPHVYAVADAAYTQMLRDDVNQSIIISGESGAGKTETAKVAMQYIATLGVGSGGIENEILQTSCILEAFGNAKTSRNDNSSRFGKLIEIHFNTRGKICGAKIETLFFGQSRVVHLCNGERSYHIFYQLCAGATSILKERLNLRMASEYKYLSQSECIKIGGIDDSANFGRLMKALSILRICKDDQEHIYEILAAILWLGNISFLVADKENHVEVTVDEALISSAKLIGCDSEELKLALSTRKIQCGKDMISVKLTLQQAVDTRDALAKFMYLSLFNWLVQRINKSLEVDKQFRGRSICILDLYGFESFQRNSFEQFCINYANERLQQHFNRHLFTLEQEDYELDGIDWIKVSFEDNQECLDLFEKKTLGLFSLLDEESDMPKATDLAFANKLKQHLNVNPRFKGERGRAFSVRHYAGEVLYDTNGFLEKNRDSLHSDYFQPLLSCNWQLLKLAATKMLYQMGTNATQNRSIGAKFKGEVFRLMHQLDNTTPHFVRCIRPNTKRLPGLYDEQLVLQQLRCYGVLEVVRISRSGYSTKMRHQDFAGRYGFLLSEGNVLKDPLSISVAILQQFHIQPEMYQVGYTKVFLRTGQVDIFETRRKQVMLGALNIQKQYRGCKARQNFHCLRNVATTLQSFVRGEIIRKRYSFVVTSSLPGSWGTLEELQAIVKLQSVIRGWIVRSHAKNMHNAGKASPGNTKSRQKESGKVPEVKETSHEQNLLSALAVLQKQVLNAESALVRKEEENAALREQLRQSDKRWIDYEMKMKSMEELWQKQMSSLQMSLAAAKRTLATDDAAFQLRRIDVSSPRLYDSEDVVSIGSRTPGESTHIKFSDIGRREANGSLRTVSNLAKEFEHYRQTFDDEAKLLVEVKSAQPADNNSDDELRRLKLRFETWKKEYKVRLRDTRARLHKLGNSEWDKGRRRWWGKFSARIS* 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01307 1203 ProSiteProfiles IQ motif profile. 876 902 IPR000048 GO:0005515
Pte1g01307 1203 ProSiteProfiles IQ motif profile. 896 925 IPR000048 GO:0005515
Pte1g01307 1203 Gene3D - 805 872 - -
Pte1g01307 1203 Coils Coil 993 1027 - -
Pte1g01307 1203 MobiDBLite consensus disorder prediction 955 982 - -
Pte1g01307 1203 Gene3D Kinesin motor domain 208 804 IPR036961 -
Pte1g01307 1203 MobiDBLite consensus disorder prediction 21 35 - -
Pte1g01307 1203 Gene3D - 876 921 - -
Pte1g01307 1203 Pfam Myosin head (motor domain) 211 859 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte1g01307 1203 PANTHER MYOSIN 205 1189 - -
Pte1g01307 1203 Gene3D Myosin VI head, motor domain, U50 subdomain 449 557 - -
Pte1g01307 1203 MobiDBLite consensus disorder prediction 21 66 - -
Pte1g01307 1203 CDD MYSc_Myo8 223 859 IPR036022 -
Pte1g01307 1203 Gene3D - 392 448 - -
Pte1g01307 1203 ProSiteProfiles IQ motif profile. 933 962 IPR000048 GO:0005515
Pte1g01307 1203 SMART MYSc_2a 203 872 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte1g01307 1203 Gene3D - 580 761 - -
Pte1g01307 1203 Pfam IQ calmodulin-binding motif 877 894 IPR000048 GO:0005515
Pte1g01307 1203 Pfam IQ calmodulin-binding motif 935 953 IPR000048 GO:0005515
Pte1g01307 1203 Pfam IQ calmodulin-binding motif 900 916 IPR000048 GO:0005515
Pte1g01307 1203 ProSiteProfiles Myosin motor domain profile. 209 871 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte1g01307 1203 PRINTS Myosin heavy chain signature 336 363 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte1g01307 1203 PRINTS Myosin heavy chain signature 293 318 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte1g01307 1203 PRINTS Myosin heavy chain signature 239 258 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte1g01307 1203 PRINTS Myosin heavy chain signature 621 649 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte1g01307 1203 PRINTS Myosin heavy chain signature 568 596 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte1g01307 1203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 918 IPR027417 -
Pte1g01307 1203 SMART iq_5 932 954 IPR000048 GO:0005515
Pte1g01307 1203 SMART iq_5 895 917 IPR000048 GO:0005515
Pte1g01307 1203 SMART iq_5 872 894 IPR000048 GO:0005515
Pte1g01307 1203 FunFam Myosin heavy chain 392 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01307 Pte-Chr1 34340324 34351895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01307 1 1197 Myosins gene family AT5G54280 58.272 0.0 1415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01307 K10357 - qsa:O6P43_029040 1586.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01307 1 34340324 34351895 Pte1g01307 1 34340324 34351895 RCT