Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte1g01294 | ATGGCACCACCCAGGCCACAACTAGGAAATTCATCCATTACACAATTTGATCTCAGCATTATGGATTCTCAATATCCTGTTTATTCATTTCCTTACTCTACTTGTTTTTCATGTCTTGTTGCTTTTGATTTTCTATTCTTAATATCAATCATCCTTGTATGCCTTCTCCTCCTTTCATTTGCTCTCTACTTCTACAAACTCATTCTAAATGACTTGCTCACATGGCTCCTCTATGGACCACCGGAGAGAAGCCGCGACTCAGGAGAAACAATCTCCCTATTCCGGAATATTGTTGCCCCATCCTTTCAGGCTGCAACATCATCACTACCTTCCACTCATGGCAACATGACATTGCTGCAAACATTTTCCATGGGGGTATTTGAAAGGCTTAGGGAGATGGAAGAACGTGAACGAAGAGAACAAGTATTTAAGATGCTGCCAGCTCCGGTGGAGTTCACAAGAGATGAGACATCAAGTTTAGATGGATGTGTTATATGCCTCGAGGATTTTCATGATGGTGAATCCTGTCGAACTTTTTCTCATTGTAGACACATATTTCATTTGAGTTGCATAGATAAATGGTTGAGTAATCATGTAACGTGTCCGATTTGCCGTGACTATGTCATAGATACTCCAGAAGTCTGA | 645 | 0.4093 | MAPPRPQLGNSSITQFDLSIMDSQYPVYSFPYSTCFSCLVAFDFLFLISIILVCLLLLSFALYFYKLILNDLLTWLLYGPPERSRDSGETISLFRNIVAPSFQAATSSLPSTHGNMTLLQTFSMGVFERLREMEERERREQVFKMLPAPVEFTRDETSSLDGCVICLEDFHDGESCRTFSHCRHIFHLSCIDKWLSNHVTCPICRDYVIDTPEV* | 215 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte1g01294 | 214 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 126 | 209 | IPR013083 | - | |
Pte1g01294 | 214 | ProSiteProfiles | Zinc finger RING-type profile. | 163 | 205 | IPR001841 | - | |
Pte1g01294 | 214 | SMART | ring_2 | 163 | 204 | IPR001841 | - | |
Pte1g01294 | 214 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 47 | 208 | IPR044675 | - | |
Pte1g01294 | 214 | SUPERFAMILY | RING/U-box | 156 | 209 | - | - | |
Pte1g01294 | 214 | Pfam | Ring finger domain | 163 | 205 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte1g01294 | Pte-Chr1 | 34198086 | 34198730 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte1g01294 | 131 | 213 | C3H Transcription Factor Family | AT1G53010 | 42.222 | 4.05e-16 | 71.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte1g01294 | - | K10664 | qsu:112004174 | 98.9821 |