Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01276 ATGGTGGGCTCAGGAGCATCAGATAGAAGCAAAGAGGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAAGCGTCTGTCTCAACTCAGACTGGACTTACTCTGTCTTCTGGACCATCCGTCCTCGCCCAAGAGTTAGAGGTGGCAATGGCTGCAAGGTTGGGGATGATAACGGTAGCTTGATGTTAATGTGGGAAGATGGATTCTGCCGAGGAAGAGTTTCAGATTGTCTAGAAGAGATTGATGGGGAGGATCCAGTCAGAAAAGCCTTCAGCAAGATGTCTATTCAGTTATATAATTATGGAGAAGGGTTGATGGGAAAGGTTGCATCTGATAAGTGCCATAAGTGGGTCTTCAAGGAGCCAACAGAATGTGAACCAAATATCTCTAACTACTGGCAGAGCTCTTTTGATGCTCTTCCTCCTGAATGGACTGATCAATTTGAGTCAGGCATACAGACAATTGCTGTCATTCAAGCTGGTCATGGCCTTCTACAGCTTGGTTCTTGCAAGATTATTCCTGAAGACCTTCATTTCGTGCTTCGAATGAGGCATACATTTGAGTCTCTCGGTTACCAGTCTGGATTTTGCTTATCACAACTATTTTCTTCTACCAGAAACGCCAACTCTTCTGCTTCTTTTCCTTCAAAGACGTCTACTATTCCAATCCGGCCTCCTCCTTCACTTTTCAACTGGGGTCAAAGTCCTCTGGCTTCTGCTGCTTCTATGCTATCTTCACCAAATTTTCAGCACGCAGCAAGATTAGGTTTTCCACAGACTAAAGATGAGACTCACATGTTTCTGATGCCTCATTCATCCGAAGCAAGGATGGAAGGAATGGTGAATGAACATGAGAATGACATCAAATGGCCAAATGGTCTATCTTTCTTCAATGCACTCACGGGACGAACTGATGATGCCAAACTTTTGTTTAATCCTGATAGCTTAGGGAACAAGCCAGACCAAAATCAGCACTCTCTAATCCTTGAAGCGAAGAACACAGATCTGATTTCCGATGCCTCCAATTTACAGAATGCTGGTGGAGGAAATGAATTCTTGAGCTTGGATAACCAGCCAGATAGTGCAAGGAAATTGGAGAACAAGTTCAAGAGAAGTTACACCTTGCCTGCAAGAGTGGCTTCTTCTTCATCCTCTACTTCAGTGGATCCTCATCAGCAACAGGCAGCGGAGTATAGGAATTCAGAAGGAGGTATGTACTCAGATGTGATGGGGACCTATTTGGATCAATAA 1251 0.446 MVGSGASDRSKEAVGMMALHEALRSVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRVSDCLEEIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFCLSQLFSSTRNANSSASFPSKTSTIPIRPPPSLFNWGQSPLASAASMLSSPNFQHAARLGFPQTKDETHMFLMPHSSEARMEGMVNEHENDIKWPNGLSFFNALTGRTDDAKLLFNPDSLGNKPDQNQHSLILEAKNTDLISDASNLQNAGGGNEFLSLDNQPDSARKLENKFKRSYTLPARVASSSSSTSVDPHQQQAAEYRNSEGGMYSDVMGTYLDQ* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01276 416 PANTHER GB|AAF34833.1 1 415 IPR044170 -
Pte1g01276 416 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 187 IPR025610 -
Pte1g01276 416 MobiDBLite consensus disorder prediction 379 400 - -
Pte1g01276 416 MobiDBLite consensus disorder prediction 379 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01276 Pte-Chr1 33985682 33988150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01276 20 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 33.140 2.15e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01276 - - qsu:112040997 731.48