Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01266 ATGGATTCCTTATCCAACAAAATTCAGAAGCACCAGCCAAAACATGACAAAAAGAGGTTAACACAAGACCAAGTGAGCATCCTAGAGAAGAGCTTTGTCTCAGACAAGAGGCTTGAGCAAGAGAGGAAGCTCCAGCTTGCTAATCAACTTGGTGTCCCTCCAAGACAAATAGCTATTTGGTATCAGAACAGACGAGCCAGGTGGAAGACTCGGAGCCTTGAGCTGGACTGTGGCGATCTTCAGTTGAAGCTGGACAATGCCTTGGCTGAGAAGAGGAAGCTGGAGAAAGATGTTGAAAGGCTGAAGTTAGAGCTCAAAAAGGCTCAGGACATGTTGAAAGACAAGGGCCCTAATGATTATACATGTTGTTCGACATCTTGTGTTGAAGAGAGTGCCAAAGGGGTTTCTTGCTTGCTAGGAGATACGGATGCATTGTGGGGTAACTGTGAGGTTTTACAGCTTGAAGAGATATATGCTTGTTTCATGGGAACAAATAGATCAAGCTTTATTAATTAA 516 0.438 MDSLSNKIQKHQPKHDKKRLTQDQVSILEKSFVSDKRLEQERKLQLANQLGVPPRQIAIWYQNRRARWKTRSLELDCGDLQLKLDNALAEKRKLEKDVERLKLELKKAQDMLKDKGPNDYTCCSTSCVEESAKGVSCLLGDTDALWGNCEVLQLEEIYACFMGTNRSSFIN* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01266 171 MobiDBLite consensus disorder prediction 1 21 - -
Pte1g01266 171 Gene3D - 10 76 - -
Pte1g01266 171 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 12 124 IPR045224 GO:0003700
Pte1g01266 171 Pfam Homeodomain 17 69 IPR001356 GO:0003677
Pte1g01266 171 Coils Coil 77 111 - -
Pte1g01266 171 ProSiteProfiles 'Homeobox' domain profile. 11 71 IPR001356 GO:0003677
Pte1g01266 171 SMART HOX_1 13 75 IPR001356 GO:0003677
Pte1g01266 171 CDD homeodomain 17 69 IPR001356 GO:0003677
Pte1g01266 171 PRINTS Lambda-repressor HTH signature 42 51 IPR000047 GO:0003677
Pte1g01266 171 PRINTS Lambda-repressor HTH signature 51 67 IPR000047 GO:0003677
Pte1g01266 171 SUPERFAMILY Homeodomain-like 13 77 IPR009057 -
Pte1g01266 171 ProSitePatterns 'Homeobox' domain signature. 46 69 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01266 Pte-Chr1 33921871 33922673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01266 12 168 Homeobox Transcription Factor Family AT5G53980 46.497 5.79e-33 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pte1g01266 Homeodomain 5.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01266 - - qsa:O6P43_000999 186.808