Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01264 ATGAAACTAACTGGTGAATCTAGTTCGTGCTCGGGTCAAAAGAAGAATGCGCGATCGGGTTTGAGACTTCGCAAGAAGCACAAGAGGCTTGATGCGATATGTGAGAAAGAGTATAATAGAAATCATGGGGAATTGAATGAGGATGATGATGGTGGAATTAGGAGTATGAATAATGACACGGACGTTCGCCGGAGCTCACGGGTTAGAAGATCGCCTGTATTGCTCGATGCATCCCCATCTCCCCCAAAGAAGCGGAGGAAGCTTGTGAAGAATGTGAAATTGAGTTGTGGAAAGAATGGGGTGAGTCCAGAGAGTGTGATTCAGAATTCTGCTGATGTAGAAAGTGCTGGAGCTTGGTCATCAAGGTTGAGGGCAAGGGGCACTCGTGTTGGTTTTTTGGTGGAGGAGGAGAAGAATATTCCACGCGGGAGAAGGAGGCTTTTCAAGAATGTACGTGGAAATTTGACTGATAGGAAAGTGGAAGCTGTAGTGAATAGGAGAAAGGAAGATTTAGACGACGTATTGTCTGCAGCTGTAAAGTCGAACATTCCAGGAAGGGTTAAAGCCACAAAGCATTTAGGGGAAGGGCACAATGCTAATACTACAAATATGAATTTGGAAGAGAATGTACGCGAAGAAGTAAAGCTTTCTAGGAATGAGGACGAAGAGACTGGTTCTGTTTCGGAAGTTGAAATGGTCAATAGAGAGTCAATAGAAATAGTGAATGACGAGGTTACTCCACCTGTTGATAGAGAAGATAGAGAAATATCAAGCAGTATGCGATTAGAAGAAGTTGGTGCAAATGAAAACATTAAGAATATTGAAGACAGTGAGAAACCTGTAGAAGGAACAAAGTGTGTGAAGGAAGATGAAAAAGGTAATGATGTCATAGATTCTTTAGGGGTTTCTAGTAATCAATTAGATAGTGATGTACATCTTGATGGAGAACACGTCACTGAAGGAAAGACCTTGCAAGATGAAGACACTATGAAAACGGATAAGCCCAACCATGTTTTGGATAGTATGCCTGGTGGAGCACGCATTAAAGGGGGTAGACGTTGTGGTTTGTGTGGGGGAGGAAATGATGGTAAACCACCAAAGAAGTTTGTAGATGAAAATGATGAAAGTGAAAACGAGGCATACAGTGGTCCTTCTGCTTCAGACGAACCAAATTATGATATTTGGGATGGCTTTGGAGATGAACCTGGCTGGCTTGGGCGTCTGTTAGGTCCTATCAACGATCGTTATGGTATTGCTGGAATATGGGTGCATCAACACTGTGCCGTGTGGAGTCCAGAGGTTTATTTTGCTGGTTTAGGATGCTTAAAGAATGTGAGGGCTGCTCTTTGCAGGGGCAGAGCATTGAAGTGCACACGATGTGGCCGGCGAGGGGCTACCATCGGATGCCGCGTTGATCGTTGTCCAAAAACATATCACTTGCCATGTGCACGAGCTGATGGATGCATCTTTGATCATCGTAAGTTTCTTATAGCCTGCACGGACCATAGGCACCTCTTCCAACCACATGGTAACAGACACTTAGATCGGATAAAGAGACTGAAGGTTAAGAAGATGAAATTGGAGATGAGGAAGCTATCAAATGATGTTTCACGAAAGGATGTTGAAGCAGAAGAGAAATGGTTAGAGAACTGTGGTGAGGATGAAGAATTTTTGAAACGGGAGAGGAAGAGGCTACACCGGGATCTTTTGAGAATTGCCCCTGAATATATTGGTGGCTCAGAATCTGAAAGGAAGGATAAGTTTCAGGGTTGGGAATCTGTTGCTGGGCTTAAAGATGTCATTCGATGCATGAAAGAAGTTGTGATATTACCTCTGCTGTATCCTGAGTTTTTTGACAGTCTAGGGCTCACGCCTCCAAGAGGTGTTCTTTTGCATGGGTATCCAGGAACTGGGAAAACTTTAGTGGTGCGAGCACTCATAGGTGCATGTGCACGTGGTGATAGGAGGATATCATATTTTGCTCGAAAAGGTGCAGATTGCTTGGGCAAGTATGTTGGTGATGCTGAGCGTCAATTGAGACTATTATTTCAGGTTGCTGAGAAATGTCAACCTTCGATAATATTCTTTGACGAGATAGATGGTTTAGCACCCTCAAGAACAAGACATCAAGATCAGACACATAATTCAGTTGTTTCAACATTGCTTGCTTTATTAGATGGCTTGAAACCTCGAGGTTCTGTTGTGGTTATAGGAGCAACAAATCGTCCTGATGCCGTTGATCCTGCACTTCGGCGTCCTGGAAGATTTGATCGGGAGATATATTTTCCACTGCCCTCGGTGGAGGACAGAGCTGCTATTCTCTCACTTCACACACAGAAATGGCCGAAACCAATTGATGGCCCTTTGCTCGAGTGGATTGCTAGGAGAACTGCTGGATATGCTGGTGCTGATCTTCAGGCTCTCTGTATGCAAGCAGCGATCACTGCATTGAAGAGGAATTTCCCTTTGCATGAAGTGCTTTCTTCTGCGGTAGATAATGTTGATAAGCACCTTCCTCTTCCAAAATTTTCTGTGGAGGAGAGTGATTGGTTGCAGGCTATATTAAGTTCTCCTCAACCATGTTCTCGCAGGGAAGCTGGGAATGCTGCTAATGATGTAGAATGCTCTTCTCTGCAGATCCACCTATTGCCTTGCCTTCTTCGACCATTATGTAACCTTCTAGTTTCACTCTATCTTAGTGACCAGATTTCATTGCCTCCTTCTGTAACGAGAGCTGCATTAACAATTAAAAATAGAATTGTTAATCAATTGGATAAAAAGAAAATGCAGATTGATCAATGGTGGTTATATGTTGATGAGTTCGTTCAAAGAGAAGACATTGCGGGTGAAATAAGTGCTAAACTAATGCATTTAAGCATTATAGTAGGAGATGCTAGCTTTGGTGGTTCTCATGCTTTTCAAGACGGTGTTGAGAATGTCAATATTGAACTTGAACCTTTTGTCAAACACAATGCTCTCACCCAAACTTGCTTATTACAAAATACATCTTCTACGTTGATTGACAAAGCTGGATTTCGGGTACTAATTGCTGGAAATTCAAAATCTGGCCAGAGACATCTTGCTTCTTGCCTTCTTAACTTCTTTGTTGGAAATGTTGAAATTCAGAAAGTAGATGCTGCTACAATATCACAGGAAGGTCGTGGAGATATGGTGCAAGGGATTGCACAATTACTAATAAAATGTGCTAATTTGAGATCATGCGTGATATACATGCCAAGAATTGACTTATGGGCGATGGAGACAAAATGTGAAACTGCAGATGACAGAGCTTCTTATGTCACCCAATATCAAAATATTGAGCATGAAAATGGATGTCATGCTGGGCCAAAAAACATTTCAGAGCCTATAAAGGACCAAAAATCCCTCAGAAGTGCATCATACAGCTGGATCTCTTTTATTGAGCAGTTTGAGTCCATTGGGGTCAAAACTTCCTTGATGGTTCTGGCTACTTCAGAAGTTCCATTTCCTGGACTTCCACATAGAGTGAGGGAGTTCTTTAAGCATGACGGATTGAGTGGCAACAGCTTGTTGGTTTCCTCGAATTACAGAGTTCCTTGTTTCACAGTGCAGATAGATGAGAATTTCGACCATGATATGGTGATAAATTTTTCAGCATCAGAGCTATCAAGGGACATGGTTAAGCATATGGTCCAGGTGATTCATCAAATAACTCACATCCAAAGCAGTCCTTCCAAGGAGGATATAGCCGATTCTGCTGAAGCTGACATGGGTAGAGTCCGTGGCAGAAGAAACGATTACTCAGCAAATGGACACATAGATACAACTCAGGGCACTGGTGAATCTGTTATGAAAATTTCCCAACAACCTAACAGCAAACAACCTAACAGCAAAGGCTTGAAAGGAAAGTCAAACCTTTCGTTAGCAATATCTTCCTTTGGCTACCAAATTCTTCTGTATCCTCATTTTGCGGAACTTTGCTGGATCACATCAAAGTTGAAAGAAGGTCCTTTTGCTGATGCAGGTGGACCTTGGAAAGGTTGGCCTTTCAATTCTTGTATTGTGCGTCCAAATAAAGTGGATAAGGTAGCTGCTGCTTGTGGAAACATGAAAACCAAAGTGAAACCTGGTTTAGTTAGAGGCCTTGTGGCTGTAGGTTTATCAGCATATAGAGGTATCTACACATCTGCCAACGAAGTCTCCCTTGAGATAAGGAAGGTTCTTGAGCTCTTAGTGGAGGAAATTAACACAAGAATCCAAGGTGGAAAAGAAAGGCATCATTATATCCGTGTTTTATCACAAGTTGCTTACCTGGAAGATATGGTAAATAGCTGGGCCCATGGATTGCTTAGTCTAGAGCCCGATTCACCAGGTGTGGAAGCAAAGCATGTGCCAACTTCGGAAGGATCTCTAAATTATAACAGGTCATGTGAATGTAATCAAGTTGAGCTTGAAGATTGCATGTTAACTGTTCCTATGGAGAGGCCTCTTGATCCAGAGGTGCTAAAGGATTATTCTCAAGAAATAAACACACAAGAACCTGAATGCTGTGACTTAGATAATAGAAGTGAGGGATCGAATGATCAGCATTTGGATGCTCCAGTTGTAAACTCTGACGCTTCAAATGAAAGAAGTAACAGTTCTGCTGTAAAACAAGTCGTTGTTGAGGACGATGAAAAGTTTAACAGCTTTGTTGCTACAAAGCCTTTCAATGATGAATTTTGTAATGAAGCAAATGGGGAGATTTCTAGATTAGACAAGTGTCAAGATTCTGAAAATCAAGTTGCAGATAAAGATTTTAGGCCCTCCAAAGAGTCTAATGGTTTTGCAAATCATAAAGAGATCTTCCTTGATGAAGGCAACCTTCAGTTTTCATGTGAAATCGAAACCGCTCAATTTGGTAATTCCGTAGAGATGTCCAACCAGGTTAGCAGTATGCCCTTGTTGGAGAATGGTCTTAAAGGAATTGATGTTAACTCCGATGCCATGGAAAATGCTATGCACTATTCCAAAAGAAATGATGTGCATGCTGAATCAGGAGCACTCTGTATGTATCAATGTTGCCCTGAATGTCTTCATAGTCTATATGGATTGTTTCAGAAAATTCTAACTAAAGAGATGGCGTTGCATGGGAGCCATTGGAGCGCAGAGGACATCCATCATGTTGTGACATCCTTGTCCATCACCCTTGCTTCGGCAGTTAGAAAAGCGTGCCTTGCGGAACCTTTCAAGGTAATTTCTACTGTAGGTTTAAATTGCGGTAAGCAAGGAATTAAGTGTCCTGATTCAAGGACAAATGGGCTCAAATTCTCTGAAAGAGTGACCACCCCAGCTGAATGTGCTTTCCATGCCACAGCATCGGGTAGTACTACCAATCATAAACAACTCAAGCTTGATTCAAAATTTATTTTCAGAGATGGCGTACTGGTTCATTTAGATGTAGACAAAGACGCAACTTTTCACTGTAAATTCGAAACCCTTTGCCTCTGTTCTCTTATAGAGTTGATAGAAACGACGAAGCACCCTTTTGATTGA 5514 0.4204 MKLTGESSSCSGQKKNARSGLRLRKKHKRLDAICEKEYNRNHGELNEDDDGGIRSMNNDTDVRRSSRVRRSPVLLDASPSPPKKRRKLVKNVKLSCGKNGVSPESVIQNSADVESAGAWSSRLRARGTRVGFLVEEEKNIPRGRRRLFKNVRGNLTDRKVEAVVNRRKEDLDDVLSAAVKSNIPGRVKATKHLGEGHNANTTNMNLEENVREEVKLSRNEDEETGSVSEVEMVNRESIEIVNDEVTPPVDREDREISSSMRLEEVGANENIKNIEDSEKPVEGTKCVKEDEKGNDVIDSLGVSSNQLDSDVHLDGEHVTEGKTLQDEDTMKTDKPNHVLDSMPGGARIKGGRRCGLCGGGNDGKPPKKFVDENDESENEAYSGPSASDEPNYDIWDGFGDEPGWLGRLLGPINDRYGIAGIWVHQHCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATIGCRVDRCPKTYHLPCARADGCIFDHRKFLIACTDHRHLFQPHGNRHLDRIKRLKVKKMKLEMRKLSNDVSRKDVEAEEKWLENCGEDEEFLKRERKRLHRDLLRIAPEYIGGSESERKDKFQGWESVAGLKDVIRCMKEVVILPLLYPEFFDSLGLTPPRGVLLHGYPGTGKTLVVRALIGACARGDRRISYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPSRTRHQDQTHNSVVSTLLALLDGLKPRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSVEDRAAILSLHTQKWPKPIDGPLLEWIARRTAGYAGADLQALCMQAAITALKRNFPLHEVLSSAVDNVDKHLPLPKFSVEESDWLQAILSSPQPCSRREAGNAANDVECSSLQIHLLPCLLRPLCNLLVSLYLSDQISLPPSVTRAALTIKNRIVNQLDKKKMQIDQWWLYVDEFVQREDIAGEISAKLMHLSIIVGDASFGGSHAFQDGVENVNIELEPFVKHNALTQTCLLQNTSSTLIDKAGFRVLIAGNSKSGQRHLASCLLNFFVGNVEIQKVDAATISQEGRGDMVQGIAQLLIKCANLRSCVIYMPRIDLWAMETKCETADDRASYVTQYQNIEHENGCHAGPKNISEPIKDQKSLRSASYSWISFIEQFESIGVKTSLMVLATSEVPFPGLPHRVREFFKHDGLSGNSLLVSSNYRVPCFTVQIDENFDHDMVINFSASELSRDMVKHMVQVIHQITHIQSSPSKEDIADSAEADMGRVRGRRNDYSANGHIDTTQGTGESVMKISQQPNSKQPNSKGLKGKSNLSLAISSFGYQILLYPHFAELCWITSKLKEGPFADAGGPWKGWPFNSCIVRPNKVDKVAAACGNMKTKVKPGLVRGLVAVGLSAYRGIYTSANEVSLEIRKVLELLVEEINTRIQGGKERHHYIRVLSQVAYLEDMVNSWAHGLLSLEPDSPGVEAKHVPTSEGSLNYNRSCECNQVELEDCMLTVPMERPLDPEVLKDYSQEINTQEPECCDLDNRSEGSNDQHLDAPVVNSDASNERSNSSAVKQVVVEDDEKFNSFVATKPFNDEFCNEANGEISRLDKCQDSENQVADKDFRPSKESNGFANHKEIFLDEGNLQFSCEIETAQFGNSVEMSNQVSSMPLLENGLKGIDVNSDAMENAMHYSKRNDVHAESGALCMYQCCPECLHSLYGLFQKILTKEMALHGSHWSAEDIHHVVTSLSITLASAVRKACLAEPFKVISTVGLNCGKQGIKCPDSRTNGLKFSERVTTPAECAFHATASGSTTNHKQLKLDSKFIFRDGVLVHLDVDKDATFHCKFETLCLCSLIELIETTKHPFD* 1838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01264 1837 Pfam PHD-like zinc-binding domain 424 503 - -
Pte1g01264 1837 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 401 505 IPR013083 -
Pte1g01264 1837 MobiDBLite consensus disorder prediction 357 392 - -
Pte1g01264 1837 ProSitePatterns AAA-protein family signature. 734 752 IPR003960 GO:0005524|GO:0016887
Pte1g01264 1837 MobiDBLite consensus disorder prediction 1262 1294 - -
Pte1g01264 1837 Pfam ATPase family associated with various cellular activities (AAA) 629 764 IPR003959 GO:0005524|GO:0016887
Pte1g01264 1837 MobiDBLite consensus disorder prediction 290 309 - -
Pte1g01264 1837 Gene3D - 765 855 - -
Pte1g01264 1837 Gene3D - 590 764 IPR027417 -
Pte1g01264 1837 SMART AAA_5 625 766 IPR003593 GO:0016887
Pte1g01264 1837 MobiDBLite consensus disorder prediction 42 88 - -
Pte1g01264 1837 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 765 855 - -
Pte1g01264 1837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 591 822 IPR027417 -
Pte1g01264 1837 MobiDBLite consensus disorder prediction 1 26 - -
Pte1g01264 1837 Pfam AAA+ lid domain 790 822 IPR041569 -
Pte1g01264 1837 MobiDBLite consensus disorder prediction 1509 1541 - -
Pte1g01264 1837 MobiDBLite consensus disorder prediction 1521 1541 - -
Pte1g01264 1837 MobiDBLite consensus disorder prediction 42 70 - -
Pte1g01264 1837 MobiDBLite consensus disorder prediction 1 16 - -
Pte1g01264 1837 ProSiteProfiles Extended PHD (ePHD) domain profile. 383 503 IPR034732 -
Pte1g01264 1837 PANTHER AAA DOMAIN-CONTAINING 16 1731 IPR045199 -
Pte1g01264 1837 MobiDBLite consensus disorder prediction 1253 1294 - -
Pte1g01264 1837 FunFam ATPase family, AAA domain-containing 2 588 771 - -
Pte1g01264 1837 FunFam P-loop containing nucleoside triphosphate hydrolases superfamily protein 349 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01264 Pte-Chr1 33906167 33915529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01264 591 835 Calmodulin-binding Proteins AT3G56690 41.434 1.35e-46 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01264 - - qsa:O6P43_029140 2018.05