Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01248 ATGGCACAATTACCTCCCAAAATCCCAGCCATGACTCAGAATTGGCCCTCCTTACCACGTCAGAAAATGCCACACCCCATGTTAAACTTCATCCCCACCAATACAACCACCACAGCCACCCTCACCCCACCATGTCAACCCCCACAACAACAACAACAACCCTCTCGGGTTGAAGAGTTCATCGACTTCTCGTCCGCAAGGTGTGGAACCCATAGGCGGTCGGCGAGTGACTCCATTGCATTCCTAGAGACCAGCAGTACATTTCTTGAAGAATGTGGCCGGAACATGGCAACCTGCACGGCTGAAACCAATGGGTTTTACCGTTTGGACGATGCAGAACTCATGTCTATGTTCAATGGCGACCTATCTGGATACTTGCCGTCCAATCCTTCCACCCCTTCCGACCAAAACAGCAACAATAATGAAAAGCCGATGGTATCAGACAATCAAAGGCAGCAGCAGCAAACAAAGAAGGAACCTGGAGCGGTTGATAGCTCATGCAAAACTGAGCCAACAGGACCCATGGCACCCTCGTCCAACAACTGCAATGACCACACCGATCCCAAGAGAGTCAAGAGAATTTTGGCTAATAGACAGTCAGCTCAAAGGTCTCGGGTGAGGAAACTACAATACATCTCTGAGCTTGAACGGAGTGTAACGACGCTGCAGACAGAGGTATCAACACTGTCACCGAGGGTTGCTTTCTTGGATCATCAACGATTGATTCTCAACGCAGACAACAGTGCCTTGAAGCAAAGAATCGCAGCTTTGGCTCAAGACAAGATTTTCAAAGATGCACATCAAGAGGCGTTGAAGAAGGAAATAGAGAGATTAAGGCAAATCTATCATCAGCAAAGTCTAAAGAAGATGGGGAACCCAGCCACCAACAATGCACATTGTTGTAATCCGTCATCAAAAGAGCAGCAGCTGTGTCATCGATATCTCAACAACTATAATCTCTGA 963 0.4777 MAQLPPKIPAMTQNWPSLPRQKMPHPMLNFIPTNTTTTATLTPPCQPPQQQQQPSRVEEFIDFSSARCGTHRRSASDSIAFLETSSTFLEECGRNMATCTAETNGFYRLDDAELMSMFNGDLSGYLPSNPSTPSDQNSNNNEKPMVSDNQRQQQQTKKEPGAVDSSCKTEPTGPMAPSSNNCNDHTDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSTLSPRVAFLDHQRLILNADNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQSLKKMGNPATNNAHCCNPSSKEQQLCHRYLNNYNL* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01248 320 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 192 207 IPR004827 GO:0003700|GO:0006355
Pte1g01248 320 SUPERFAMILY Leucine zipper domain 189 243 IPR046347 GO:0003700|GO:0006355
Pte1g01248 320 PANTHER BASIC LEUCINE ZIPPER 34 1 305 - -
Pte1g01248 320 Gene3D - 188 261 - -
Pte1g01248 320 MobiDBLite consensus disorder prediction 123 162 - -
Pte1g01248 320 FunFam Basic leucine zipper 61 188 261 - -
Pte1g01248 320 CDD bZIP_plant_RF2 190 240 IPR044759 GO:0003700|GO:0006355
Pte1g01248 320 Pfam bZIP transcription factor 189 233 IPR004827 GO:0003700|GO:0006355
Pte1g01248 320 MobiDBLite consensus disorder prediction 123 187 - -
Pte1g01248 320 Coils Coil 268 288 - -
Pte1g01248 320 MobiDBLite consensus disorder prediction 1 21 - -
Pte1g01248 320 SMART brlzneu 185 249 IPR004827 GO:0003700|GO:0006355
Pte1g01248 320 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 250 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01248 Pte-Chr1 33678523 33680397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01248 1 266 bZIP Transcription Factor Family AT3G58120 51.645 2.08e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte1g01248 bZIP_1 3.9e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01248 - - qsa:O6P43_001014 375.17