Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01246 ATGAGTCTTTGTTTTTTTATGTGTACACTGACTCATCTCACCTCAGCATTGGGAATGAGTCCAAAAGATTGGTTTAGGACCATTACAAAGCTGAAAAGGGGAAAAAGAAACCATTCCAAACAAGTAAAGGTACTTGCATCCTTCTGCCCTTTTTTGTTTTTATGGTTTGTTCTGATATTCAATTTCAGGACCTTGTTTCCAGACTTTAACTATTTCCCAAGGATTCAGAGGTTCCCCATACTTCGGGTGGTTTTTGTCCCCATACTCAAGATTTTGGTTTTCGGATTACCATGCACTTTTTTCTTTTTTTTTAACATGTTTCAACTTTCCTGGGGCCTTGTTCTAGCTGTTGAATGTTTCCTTATTATTGTTCTGTTTAAGGCACAATGCACTGCCGAGAAATCAAATGGCACATCTGACTTGAATTCTTCTCATCATGAAGAATTGAGCGTTGATGTTGTCCATGGAAATTTGGTTGTCGAGCAACCTGAGGATGAAAGGTCGATTGAAGATATGGCAGCAACTCAAATTCAGACCGCATTTCGATCGTTTAGGGAAAGAAAAGCAGTGCACCCATTTAAGGAATCTGACAGATTTCAAGCTTACATTGAAGATCCAACTGCTGCCATACAAATAAGAACTGCATTGAGTTACATACATGCATGGAGCAGGATCCAGGACCAGATTAGGGCTCGCCGAGTCTGTATGGTTACACAAGCTCGAATGAAGCAGAAAAAACTGGAAAATCAGCTGAAACTTGATGCCAAGCTTCACGACTTGGAGGTGGAGTGGTGCAGTGGTTCTGAAACCATGGAAGAAATACTTTCTAGGATACAACAGAGAGAAACAGCTGCAATTAAGAGAGAGAGAGCCATGGCATATGCTTTTTCACATCAGTGGAGGCCGAACTGTAGCCAATATTTCGGTCAGCCTTCATACATACTTGACAAAGAAAACTCGGGTTGGAGCTGGCTGGACCGATGGATAGCAGCTCGTCCATGGGAAGTTCGAGTTCGAGTTCAACCCACCAATATAAATAAACTCCGTAATCAACATTGCACTAAGTGGAACTATGTATCAAGCCACCGGGAAACAAAGCTGGTCTCAGTTATACCTACGCTCTCAAATGGCAAGGAAATCTCCAAAGGGAAAGAGAAGAGGTTGGCTCCATCAGACTGTCAACCAACTAGCCCCTATACAACTTCCTGTCATCATCTCTAA 1221 0.4201 MSLCFFMCTLTHLTSALGMSPKDWFRTITKLKRGKRNHSKQVKVLASFCPFLFLWFVLIFNFRTLFPDFNYFPRIQRFPILRVVFVPILKILVFGLPCTFFFFFNMFQLSWGLVLAVECFLIIVLFKAQCTAEKSNGTSDLNSSHHEELSVDVVHGNLVVEQPEDERSIEDMAATQIQTAFRSFRERKAVHPFKESDRFQAYIEDPTAAIQIRTALSYIHAWSRIQDQIRARRVCMVTQARMKQKKLENQLKLDAKLHDLEVEWCSGSETMEEILSRIQQRETAAIKRERAMAYAFSHQWRPNCSQYFGQPSYILDKENSGWSWLDRWIAARPWEVRVRVQPTNINKLRNQHCTKWNYVSSHRETKLVSVIPTLSNGKEISKGKEKRLAPSDCQPTSPYTTSCHHL* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01246 406 PANTHER IQ-DOMAIN 5-RELATED 154 366 - -
Pte1g01246 406 ProSiteProfiles IQ motif profile. 170 198 IPR000048 GO:0005515
Pte1g01246 406 MobiDBLite consensus disorder prediction 379 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01246 Pte-Chr1 33650992 33653793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01246 171 339 IQD Protein Family AT3G15050 60.355 1.68e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01246 - - qsa:O6P43_029158 307.375