Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01245 ATGGGAGACAGACGGCACGAAGCAACAGCATCTACAAGGTTTGGGTTGAGAGGTGGAGGTGGAGAAATTGTAGAGGTGCAAGGAGGTCACATTGTTCGGTCTACTGGACGAAAGGACAGACACAGCAAGATATGTACAGCAAAGGGTCCACGAGACCGACGAGTCCGTCTCTCTGCCCACACAGCTATTCAGTTCTACGACGTACAAGACCGCCTTGGCTACGATCGTCCAAGCAAAGCCGTCGATTGGCTTATCAAAAAGGCCAAGGCAGCCATAGACGAGCTTGCGGAGCTACCAGCATGGGACCCACATGCGACCAACGCAGGCTTACAGCAACAGCAGCAGCAGCTGCCGCAGATGAATCAAGGGAACGACGACCAAATTGGTGTCCATCACCGAACCTCGGTGGACACCGGAATTTCTGCTAACCGGAGAGCAACAACAGCAATGGTGGGTAGCCATGTTGGGAGTAGACTGTCAGATTGTACTGTGAGGAATCTTCAACGACGGTTAGACGAAAACGCAAATAACTGCACTTCGAGTTTTCTCCCACCGTCGTTGGAATCTGACTCCATTGTCGATACAATCAAGTCCTTCTTTCCAATGGGTGCGACAGCCGAGACCCCGCCATCAACTATGCAGTTTCAGACTTTCCTACCAGATTTGCTTTCTAGAACCAGTTGCCAGAATCAAGATCTGCGGCTTTCGCTTCAGTCCTTTCAGGATCCAGTTCTGCTTCACCATCACCACCAAGCGCAGCACCAAGCTCAAACTCAGAATCAAACTGAACACGTACTTTTCTCTGGAACTGACCAACTTGGATTTGACGGTTCGTCCACTGGATGGTCAGAGCAGTCTCATCCAGTTGAATCTGGTCGGCTTCAGAGGACAGTAACTTGGACTGGTGCTGCTGATGCTGGCAGTAGTGATAATGGCACAACTGCCGGTAGCGGTGGAGGAGGAGTTTTTCTATTCAACTCACCACCACCAATGCAGGCTCAATCGCTACCACCACTACAGCCGTTTTTTTGTCAAAGCCAGTTTCTTTCACAGAGGGGACCCCTTCAGTCCAGCAACCCCCCAGTTCGTGCTTGGATAGACCCGTCAATGGCAGCAGTCACAGCAGCTGTCAGCAATTACCATCACCATCACAACCATCTTCCAAAAAACATTCATCAATTTCCATTATCGGGTTTAGGATTCACCTCTGGTGGATTCTCTGGTTTCCAAATTCCAGCACGAATTCAGGGTGAAGAGGAACACGATGGCATATCAGATAAGCCATCCTCTGCTTCCTCCGATTCTCGCCGTTGA 1314 0.5038 MGDRRHEATASTRFGLRGGGGEIVEVQGGHIVRSTGRKDRHSKICTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPAWDPHATNAGLQQQQQQLPQMNQGNDDQIGVHHRTSVDTGISANRRATTAMVGSHVGSRLSDCTVRNLQRRLDENANNCTSSFLPPSLESDSIVDTIKSFFPMGATAETPPSTMQFQTFLPDLLSRTSCQNQDLRLSLQSFQDPVLLHHHHQAQHQAQTQNQTEHVLFSGTDQLGFDGSSTGWSEQSHPVESGRLQRTVTWTGAADAGSSDNGTTAGSGGGGVFLFNSPPPMQAQSLPPLQPFFCQSQFLSQRGPLQSSNPPVRAWIDPSMAAVTAAVSNYHHHHNHLPKNIHQFPLSGLGFTSGGFSGFQIPARIQGEEEHDGISDKPSSASSDSRR* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01245 437 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 31 357 IPR005333 GO:0003700
Pte1g01245 437 MobiDBLite consensus disorder prediction 414 437 - -
Pte1g01245 437 MobiDBLite consensus disorder prediction 415 437 - -
Pte1g01245 437 ProSiteProfiles TCP domain profile. 37 95 IPR017887 -
Pte1g01245 437 Pfam TCP family transcription factor 36 119 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01245 Pte-Chr1 33646613 33650240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01245 5 438 TCP Transcription Factor Family AT3G15030 49.142 2.90e-103 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte1g01245 TCP 6.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01245 - - qsa:O6P43_029159 483.796