Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01238 ATGGCTCATCCCAATACTACTCCTGTCTCTCTGTCCTCTTTCTTTCTCATTTCGTCACTTGTTTTAGCTTCTCAGTTTTGTACCTTTGAGGCTCAAACTGACATCCCCATAGTTAATGGACTCTCATGGACATTTTATCAATCTACCTGTCCTAACCTTAAATCCATCGTCAGGAGCCACCTCAAAAATAATGTCTTTAAAAATGACATCACCCAGGCTGCTGGCCTGCTGCGTCTTCATTTCCATGACTGCTTTGTTCAGGGGTGTGATGGTTCAGTTTTGCTTGATGGAACAGCCAGTACGCCGGGTGAGAAGCAGTCACCTCCTAACTTGACTTTGAGACCTAAGGCGTTTCAAATCATTAACGAACTCCGTGAGCTAGTTCATAAGCAATGTGGAAGAGTTGTTTCTTGCGCTGACATCACTGCTCTTGCTGCACGAGACTCTGTCTTTTTGTCGGGAGGACCAGAATATGATGTGCCTTTGGGAAGACGAGATGCATTCAACTTTGCCTCAAACCAAACAACATTGGCGAATCTTCCTGCACCTACGAGCAATGCTGGAGTCATACTCAGTGCCCTTGGAAACAAAAGTTTCGATGCTACAGATGTTGTGGCCTTGTCTGGAGGTCACACCCTTGGCCGAGGCCACTGCACATCCTTCACCAATAGGTTGTATCCCAACCAAGACTCCAACATGGACAAAACCTTTGCCAACAATCTGAAACTCACTTGTCCTAAGAGTGATACCGATAACACGACGGTCTTAGACCTTCGATCACCTAACAAGTTTGACAACAAATACTACGTTGATCTCATGAATCGCCAAGGGCTGTTCACTTCTGATCAAGACTTGTACTCAGATTCAAGGACAAGGAGCATCATTACCAGCTTTGCTGTGAATGAAACCCTCTTCTTTGAGAAGTTCGTCCGTGCCATCATTAAGATGAGTATGTTGAATGTCACAACGGGAAACCAAGGAATGATTCCATGGTTTTTGTTGTCTTTTCAGCATTGTTTGAATTGCATGCGTGATGAGCTAGCCAATCTAAAGGACAGATGCACATCGTGCTCAGATGGACAACCTGGTGGAGTAGAGATTTCAGACATTCAGAATGTTAACCTGTATACTTACAAGGAACTACAGAATGCTACAGACAATTTCAGTTCAGCAAATAAGATAGGCCAAGGAGGTTTTGGATCTGTGTACAAGGGGGAGGTAGGAAATGGTAATACAGTTGCAATAAAGGTATTGTCATCAGACTCTGTACAAGGGGTTAAAGAGTTTTTGACTGAGATCAAGGTCATCTCAAGTGTAGAGCATGAGAATTTGGTGAAGTTATATGGTTGCTGTGTTGAAAAAGACCATAGGATCTTGGCATGGGATTTATTTGAGAAGAGACAGCTTGAGAACTTAGTGGATACGTCTTTAAATGGAGATTTTGATGTTGAGGAGGCACGTAGATTTTTGCAAATAGGTCTTCTTTGTTCACAGGACAGTGCAAAGCAGAGACCATCAATGTCTACTGTGCTTGGAATGCTATTAGGTGAAATAGATGTGAATGAAAAAGCAATAACAAAACCGGGGCTTCTTTTCAACTTCTTGAACACCATGGATGGTAGGAGTACACAAGGTAAACCTGAAGGTCTAAACACGTCTGCCACTGTTTCTACTGACACGGGAAAGTTGGTTTCTTGGTCATCTTCCTCAGAAAATACAAGTTCCTCTCATGCTACCATGACTTTCACATCAATATACGATCGTACCATCTAG 1773 0.4298 MAHPNTTPVSLSSFFLISSLVLASQFCTFEAQTDIPIVNGLSWTFYQSTCPNLKSIVRSHLKNNVFKNDITQAAGLLRLHFHDCFVQGCDGSVLLDGTASTPGEKQSPPNLTLRPKAFQIINELRELVHKQCGRVVSCADITALAARDSVFLSGGPEYDVPLGRRDAFNFASNQTTLANLPAPTSNAGVILSALGNKSFDATDVVALSGGHTLGRGHCTSFTNRLYPNQDSNMDKTFANNLKLTCPKSDTDNTTVLDLRSPNKFDNKYYVDLMNRQGLFTSDQDLYSDSRTRSIITSFAVNETLFFEKFVRAIIKMSMLNVTTGNQGMIPWFLLSFQHCLNCMRDELANLKDRCTSCSDGQPGGVEISDIQNVNLYTYKELQNATDNFSSANKIGQGGFGSVYKGEVGNGNTVAIKVLSSDSVQGVKEFLTEIKVISSVEHENLVKLYGCCVEKDHRILAWDLFEKRQLENLVDTSLNGDFDVEEARRFLQIGLLCSQDSAKQRPSMSTVLGMLLGEIDVNEKAITKPGLLFNFLNTMDGRSTQGKPEGLNTSATVSTDTGKLVSWSSSSENTSSSHATMTFTSIYDRTI* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01238 590 Gene3D Phosphorylase Kinase; domain 1 364 462 - -
Pte1g01238 590 ProSitePatterns Protein kinases ATP-binding region signature. 394 416 IPR017441 GO:0005524
Pte1g01238 590 SUPERFAMILY Protein kinase-like (PK-like) 368 490 IPR011009 -
Pte1g01238 590 PANTHER PEROXIDASE 25-RELATED 22 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte1g01238 590 PRINTS Plant peroxidase signature 271 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte1g01238 590 PRINTS Plant peroxidase signature 116 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte1g01238 590 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte1g01238 590 PRINTS Plant peroxidase signature 135 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte1g01238 590 PRINTS Plant peroxidase signature 202 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte1g01238 590 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte1g01238 590 PRINTS Plant peroxidase signature 255 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte1g01238 590 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte1g01238 590 FunFam Peroxidase 44 193 - -
Pte1g01238 590 ProSiteProfiles Plant heme peroxidase family profile. 40 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte1g01238 590 Pfam Peroxidase 64 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte1g01238 590 Pfam Protein kinase domain 390 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01238 590 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601
Pte1g01238 590 ProSitePatterns Peroxidases proximal heme-ligand signature. 203 213 IPR019793 -
Pte1g01238 590 SUPERFAMILY Heme-dependent peroxidases 36 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pte1g01238 590 FunFam Peroxidase 181 316 - -
Pte1g01238 590 Gene3D Peroxidase, domain 2 182 317 - -
Pte1g01238 590 FunFam Serine/threonine-protein kinase receptor 360 463 - -
Pte1g01238 590 Gene3D - 44 329 - -
Pte1g01238 590 PRINTS Haem peroxidase superfamily signature 203 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte1g01238 590 PRINTS Haem peroxidase superfamily signature 136 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte1g01238 590 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte1g01238 590 PRINTS Haem peroxidase superfamily signature 154 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte1g01238 590 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte1g01238 590 ProSiteProfiles Protein kinase domain profile. 388 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01238 590 CDD secretory_peroxidase 40 329 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01238 Pte-Chr1 33548440 33553779 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01238 13 329 Peroxidase AT1G71695 60.559 2.16e-138 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte1g01238 peroxidase 9.7e-71 CL0617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01238 K00430 - fve:101310766 469.544