Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01237 ATGTCGCATTCTGGGAAGCCTTCTTCTGAGCCAGGGTTGGATGCTCTTAACGATCGGTTGAGGGACTCACTGAGCTGTGAGGTAAACAAACCAGATTTTAGAGAACTCGATCTGGGATCACCTGTTTCGCCGTTGAGGCCTCGACAGAGTAGACAGGCTGCTGGTGGATTGACTACCACTGCCAGCAGTAGCTCTAGTTCGTCTGGATCAGTATCTGGGCGAAATGGGGACAATCCAGCTGCAAAAAAATCCGATTCCGGTCATAACAGTCACTCCGGTGAGCTTTCTGGGTCTAGTGAGAATAGTCCAACTGCCACCGAGAGCATACGATCCGCTGGAACAGTCAGGAATTCTAAAATGGGTCATACCAGATCCGATTCGGGTACTCTCCAACCGTTAATTTATTCGGGTCAAAGCTCAGTCAATTCGCCGCTGCTGAATGTGCTACCAACTGGGAATATTTGCCCATCTGGCAAGATTCTGAAGACGGGTATGGCTTCCAATCGGAGCTCCAGAACGGATGTTCTGGGCTCCGGGACTGGTAATTACGGCCACGGAAGCATAATGCGGGGTGGTGTGGCCGTTAAAAGTGGTGGAGGAGAAACCATTAGATTAACAACTGTAAAAGCTAGTGGCAATGCTGCTTCTGCTGGCGGTGGTGTCAGTGACCCACCGAAGCGAGCTATGCTGAATGTGGATCCTGAAGAGCTGAAGAAAGCTGGGAATGAGCAGTACAAAAGGGGTCATTTTAGCGAGGCGTTGAATCTGTATGATCGGGCAGTTGCTTTATCGCCGGCCAATGCAGCGTACCGGAGTAACAGGGCTGCAGCATTGATGAATTTAGGACGATTAGGCGAGGCAGTGAAAGAAAGTGAGGAGGCTGTGAGGTTAGATCCTCATTACACAAGGGCGCATCATCGTTTGGCTTCTCTTCTTCTCCGGTTAGGACAAGTTGAGAATGCAAGGAAGCATCTTTGTTATCCTGGGTCCCAACCAGACGCATCTGACATGAAGAAGTTGCAATTGTTGGAAAAGCATTTGACCAAATGTACAGATGCCCGGAGAATAAGTGACTGGAGAAGTGTTCTTAGGGAAATCAATGCTGCTGTTTCTGCTGGAGCGGATTCTTCTCCCGAGCTCTTTATGTGTAGAGCAGAAGCACTCTTAAAGCTGAACCAAATTGATGCCGCTGAATCTACTATATCAAACATCCCGAAAGTGGAACCATATACCAATTCCTGTTCCCAGGCAAGGTTTTTTGGAATACTTTCTGAAGCTTATAACTTCTTTGTCCGTGCTCAAATTGAGATGGCATTAGGGCGGTTTGACAATGCAGTTACATTTATGAAGAAAGCTGCACATATTGATCCTCGTAATGTTGAAGTTGCCGTGTTGCTTAAGAATGTTAGATTGGTAGCCCAAGCTCGTGAACGAGGAAATGATCTATTTAAATCTGAAAGGTTCACGGAAGCATGCTCAGCATATGGAGAAGGTCTGCGGTTTGATCCCTTAAATGCAGTGCTATATTGTAATAGAGCAGCATGTTGGTTTAAGCTTGGCAATTGGGAACAATCGATTGATGACTCCAATCAAGCTTTACGTATCCAACCCAATTATAGAAAGGCACTTCTTCGAAGGGCTGCATCAAACAGCAAGTTGGAAAGATGGGTTGAAGCAGTCAGTGATTATGAGGCCTTGAGGAGAGATCTTCCAGATGATAATGAAGTTGCTGAAGCTTTATTCCATGCCCAAATTGCATTGAAGAAATCTCGTGGGGAAGAAGTCCAAAATATGAAATTTGGTGGTGAAGTGGAAGAAGTATCAGGGCTCGACCAATTCAGAGCTGCCATAACATCACCAGGAGTATCAGTTGTCCATTTTGGAACTGCCTCTAATTCTCAGTGCCAGCAAATATCTCCAATCCTGAATATGCTATGTAGTCGCTATCCACTGATGAACTTTCTAAAGGTTGACATTGAGGAGAGCCCAGCAGTAGCAAAGGCCGAGAATGTGAGGGTTGTACCAACATTCAAGATTTACAAAAATGGTAGCCAACTGAAGGAAATTATTTGCCCTGCTCATGACGTGTTGGAACATTCAGTGAGGCATTACAGCTTTTAA 2121 0.4592 MSHSGKPSSEPGLDALNDRLRDSLSCEVNKPDFRELDLGSPVSPLRPRQSRQAAGGLTTTASSSSSSSGSVSGRNGDNPAAKKSDSGHNSHSGELSGSSENSPTATESIRSAGTVRNSKMGHTRSDSGTLQPLIYSGQSSVNSPLLNVLPTGNICPSGKILKTGMASNRSSRTDVLGSGTGNYGHGSIMRGGVAVKSGGGETIRLTTVKASGNAASAGGGVSDPPKRAMLNVDPEELKKAGNEQYKRGHFSEALNLYDRAVALSPANAAYRSNRAAALMNLGRLGEAVKESEEAVRLDPHYTRAHHRLASLLLRLGQVENARKHLCYPGSQPDASDMKKLQLLEKHLTKCTDARRISDWRSVLREINAAVSAGADSSPELFMCRAEALLKLNQIDAAESTISNIPKVEPYTNSCSQARFFGILSEAYNFFVRAQIEMALGRFDNAVTFMKKAAHIDPRNVEVAVLLKNVRLVAQARERGNDLFKSERFTEACSAYGEGLRFDPLNAVLYCNRAACWFKLGNWEQSIDDSNQALRIQPNYRKALLRRAASNSKLERWVEAVSDYEALRRDLPDDNEVAEALFHAQIALKKSRGEEVQNMKFGGEVEEVSGLDQFRAAITSPGVSVVHFGTASNSQCQQISPILNMLCSRYPLMNFLKVDIEESPAVAKAENVRVVPTFKIYKNGSQLKEIICPAHDVLEHSVRHYSF* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01237 706 CDD TRX_family 611 692 - -
Pte1g01237 706 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 21 703 IPR044534 -
Pte1g01237 706 Pfam Tetratricopeptide repeat 430 458 IPR019734 GO:0005515
Pte1g01237 706 ProSiteProfiles TPR repeat profile. 506 539 IPR019734 GO:0005515
Pte1g01237 706 SUPERFAMILY TPR-like 234 462 IPR011990 GO:0005515
Pte1g01237 706 MobiDBLite consensus disorder prediction 52 131 - -
Pte1g01237 706 SMART tpr_5 540 573 IPR019734 GO:0005515
Pte1g01237 706 SMART tpr_5 506 539 IPR019734 GO:0005515
Pte1g01237 706 SMART tpr_5 426 459 IPR019734 GO:0005515
Pte1g01237 706 SMART tpr_5 234 267 IPR019734 GO:0005515
Pte1g01237 706 SMART tpr_5 472 505 IPR019734 GO:0005515
Pte1g01237 706 SMART tpr_5 268 301 IPR019734 GO:0005515
Pte1g01237 706 SMART tpr_5 378 411 IPR019734 GO:0005515
Pte1g01237 706 ProSiteProfiles TPR repeat profile. 234 267 IPR019734 GO:0005515
Pte1g01237 706 ProSiteProfiles TPR repeat profile. 426 459 IPR019734 GO:0005515
Pte1g01237 706 MobiDBLite consensus disorder prediction 28 131 - -
Pte1g01237 706 FunFam TPR repeat-containing thioredoxin TTL4 598 705 - -
Pte1g01237 706 SUPERFAMILY Thioredoxin-like 509 704 IPR036249 -
Pte1g01237 706 Pfam TPR repeat 241 282 - -
Pte1g01237 706 Pfam Thioredoxin 611 694 IPR013766 -
Pte1g01237 706 Gene3D Tetratricopeptide repeat domain 232 592 IPR011990 GO:0005515
Pte1g01237 706 Gene3D Glutaredoxin 596 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01237 Pte-Chr1 33534908 33539167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01237 476 542 U-box Gene Family AT3G07370 35.821 4.01e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01237 - - qsa:O6P43_029173 1088.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01237 1 33534908 33539167 Pte1g01237 1 33534908 33539167 RCT