Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01225 ATGATGCCTAGCTTCACTCAATTCCATGAGTCATGGTTCAACCAGCTGCACCATCTGATGAACCAGCTCCGCTCTGCAACAAAACCACCAAGAACCCTAGATGATCATCAGAACCTCGTTGACCTTGTTAACAAGTTCCTATCCCACTATGACAAGTACTGCCAGACCAAGTCTACAGCTACAGAGAACGATGCCCTCTCCATCATTGCTGCACCTTGGGCTACATATCTTGAACGTTCTTTGCAATGGATTGCTGGCTGGAGACCTACTACCGCTTTCCACCTTTTGTACTCTGAATCTTCTATACTACTCGAGTCCAACATCGTTGATATCCTTCGTGGGTTACGTACGGGAGACCTTGGCGACCTGTCACCACCTCAGTTCCGGCGAATCAGTGACTTACAATGCGAGACGGTAAATGAAGAGAATGCCATAACTGAGGAGCTGTCGGAGTGGCATGACAGTGTAATTGATTTTATTGAAGATGGTGAGGGTTCCATGGGTTTTGAAGAGAAGATAGGGCAGTTGGCGAATGTGATGAAGAAGGCTGATGATTTGAGACTCAGAACGTTGAGAAGGGTGGTGGAGCTGCTAACACCGCATCAGGCGGTGGAGTTCTTAATTGCTGCGGCTGAGTTACGGTTTGGGATCCGAGAATGGGGCTTAATCCAAGACCAAACACGCAGAAGAAGATGA 696 0.4784 MMPSFTQFHESWFNQLHHLMNQLRSATKPPRTLDDHQNLVDLVNKFLSHYDKYCQTKSTATENDALSIIAAPWATYLERSLQWIAGWRPTTAFHLLYSESSILLESNIVDILRGLRTGDLGDLSPPQFRRISDLQCETVNEENAITEELSEWHDSVIDFIEDGEGSMGFEEKIGQLANVMKKADDLRLRTLRRVVELLTPHQAVEFLIAAAELRFGIREWGLIQDQTRRRR* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01225 231 ProSiteProfiles DOG1 domain profile. 2 227 IPR025422 GO:0006351|GO:0043565
Pte1g01225 231 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 4 229 - -
Pte1g01225 231 Pfam Seed dormancy control 20 98 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01225 Pte-Chr1 33424091 33425463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01225 4 209 bZIP Transcription Factor Family AT5G06950 24.664 4.88e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01225 - - qsu:112025691 280.796