Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01219 ATGGGAGGTGGATTTAGAGTCCTTCATCTAGTCAGACCATTTCTCTCATTTCTACCTGAGGTTCAGAGTGCTGACAGAAAAGTCCCTTTTAGAGAGAAGGTCATATACACGGTGATCTCTCTTTTCATTTTCCTGGTTTGCAGTCAACTTCCTCTCTATGGTATACACTCCACAACAGGTGCGGATCCATTCTATTGGATGCGTGTTATCCTTGCCTCAAACCGGGGGACAGTCATGGAGCTTGGAATTACCCCCATTGTTACTTCTGGATTGGTTATGCAACTTCTGGCTGGGTCAAAAATAATTGAAGTGGACAACAATGTCCGTGAAGATCGTGCTCTCTTAAATGGAGCGCAGAAGCTACTTGGCATTTTGATTGCTGTTGGTGAGGCAGTTGCCTATGTCCTTTCTGGAATGTATGGCAGTGTGAGCCAACTTGGAGTAGGGAATGCGATACTTATCATCATTCAGCTGTGCTTTGCTGGTATAATTGTTATATGCTTGGATGAACTACTTCAGAAAGGATACGGTCTGGGCTCTGGAATTTCCCTTTTCATTGCAACGAATATTTGTGAAAATATCATCTGGAAGGCATTCAGCCCCACTACCATAAATAGTGGAAGGGGAGCTGAATTTGAGGGAGCTGTTATTGCTCTTTTCCACTTACTTATTACTCGGACCGATAAAGTGCGAGCTCTTCGCGAAGCCTTTTACAGGCAGAATCTTCCAAATGTTACAAATCTGCTTGCTACTGTCTTGATCTTCCTGATTGTGATATACTTCCAAGGGTTCCGTGTAGTTTTACCTGTAAGATCAAAGAATGCTCGTGGGCAGCAGGGTTCATATCCTATTAAACTCTTCTACACGTCCAATATGCCCATTATTCTACAATCTGCCCTTGTCTCCAATCTCTACTTCATCTCTCAGTTGCTCCACCGGAAGTACAGTAGTAATTTCATTGTCAACCTTTTGGGTAAATGGAAAGAATCTGAGTATGGTGGTCAGTCAGTTCCTGTGGGTGGTATTGCTTATTATATCACTGCACCATCAAGCTTAGCTGATATGGCAGCCAATCCTTTCCATGCACTGTTCTATCTTGTCTTCATGTTGTCAGCATGTGCTTTATTCTCAAAAACTTGGATTGAAGTTTCTGGTTCATCCGCTAGAGATGTTGCCAAGCAGCTTAAGGAACAACAAATGGTGATGCCTGGACACAGAGAGTCAAACTTACAGAAAGAACTTAACCGCTACATTCCAACTGCTGCAGCATTCGGAGGCATATGTATTGGTGCGCTGACCGTGTTGGCAGACTTCATGGGAGCAATTGGTTCAGGGACAGGTATTCTGCTTGCAGTGACAATCATTTATCAATACTTCGAGACCTTCGAAAAGGAAAGAGCTAGTGAGCTTGGGTTCTTCGGATTTTAG 1428 0.4342 MGGGFRVLHLVRPFLSFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVSQLGVGNAILIIIQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSNLYFISQLLHRKYSSNFIVNLLGKWKESEYGGQSVPVGGIAYYITAPSSLADMAANPFHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01219 475 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 18 469 IPR002208 GO:0015031|GO:0016020
Pte1g01219 475 ProSitePatterns Protein secY signature 1. 77 96 IPR030659 -
Pte1g01219 475 FunFam Transport Sec61 subunit alpha isoform 2 9 473 - -
Pte1g01219 475 SUPERFAMILY Preprotein translocase SecY subunit 10 465 IPR023201 -
Pte1g01219 475 Gene3D SecY subunit domain 9 473 IPR023201 -
Pte1g01219 475 NCBIfam preprotein translocase subunit SecY 31 466 IPR002208 GO:0015031|GO:0016020
Pte1g01219 475 Pfam Plug domain of Sec61p 42 76 IPR019561 -
Pte1g01219 475 PIRSF SecY_Sec61alpha 8 470 IPR002208 GO:0015031|GO:0016020
Pte1g01219 475 Pfam SecY 77 458 IPR002208 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01219 Pte-Chr1 33284201 33287836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01219 1 476 Miscellaneous Gene Families AT2G34250 93.277 0.0 911
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01219 K10956 - gmx:100817566 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01219 1 33284201 33287836 Pte1g01219 1 33284201 33287836 RCT