Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01217 ATGGCACACTCGGTGAAAATATTAGGGGTTGACTCCATTCCTCCATCGTCTTCCTCTTTGACTGAGTCATCTGTCCCACTCACTTTTTTTGATTTATTTTGGTTTAGATTTCATCCAGTTGAGCGTGTGTTCTTCTATTCGCTTCCTGAAGCAGATGATGATTCTTACTTCTTTGATTTTGTAGTTCCAAAACTCAAAGATTCACTCTCTCTCGCCCTCCAATACTTTCTCCCCCTTGCGGGGAACATCATTTGGCCTCAAGAATCAGAAAAGCCCTTCATCAAACATAATCCAGGAGATGGAGTTTTATTCACTGTAGCACAGTCTCATGCAGACTTCAAAAACATCTCAAACTATAATTCCTACAACGCGTCAGAGTCTCGTGCCTTAGTACCCCACTTGCACATATCTGAGAGCAGTGCTTCTATACTGGCTCTGCAGGCGACTTTGTTTCCCAAGAGAGGGTTTTCCGTTGGAATTTCAACCCACCACGCAATCCTTGATGGGAAATCTTCGACAATGTTTATGAAGTTATGGGCCTATTTATGCAAAGAGAGCAAGGAATCGAACAAGTCCTCTTCTTTGCCAAAAGAACTAAGGCCATGCATTGACCGTAGTGTTATCAAGGACCCAAAGGGTCTTGATGTGAAGCATCTGAAATTATGGGCCAAAATGTTCATTGCAGCTGGCTCGGATGCCAACCATGCTGTCAGAAGTGTTCAAATTTTGCCTGAATATACCGGGACTGGAAACCAGGAATTAGTGCAAACAACATTTACGTTGAACCGCGAAGATATTGAGAATTTGAGGAAGAGGGTGCTATCCCTTTGGGAAAAGGTGAGCAAAGAGGAAAAGAATCCAGAAAAGCCGGTGAAGCTGTCAACATTTATGCTTACTTGTGCTCATGTGCTGGTTTGCATAAATCAAGCTATTCGACTAGAAGAAAGCAGGAAGATTATATTTGCATTCCCAGTTGATTGCAGAGAAAGACTAAAGCCACCTATTGATCCAAATTATTTAGGTAATTGTGTTTCTGCTTCTATGCTACCTGTAGATCATGAAGAAATTTACAGTGATGGTGGGGTGGCCTTTGTTTCCAAGAAAATCTATGAGGAAATAGAGAGTTTCAAGAAGGATGCACTGGGTAGAATGGAGTCTGCACTTGAATTTTGGAATTCTGTGGCGTCAGCTGGGCATCGGATTATAGGGGTAGCAGGATCGCCACGTTTTGGGGTTTATGAGACAGATTTTGGATGGGGAAAACCGGACAAGGTGGAGATACCATCAGTTGGTACAACTGGATCGATTGCGTTAGCTGAAAGCAGGGATGGAAATGGAGTTGAAGTTGGTTTGGTTTACCCCAAGCATGAGATGGACCTCATTGCTGCTGCTTTCTACAAGGGCCTGCGGCATAGAAACTCAAACGGAGATAGCAACGGTGACATAAACATAAACGTCAACAACCGGCCTGAAGCCAGTCCGAAACAAAAATGA 1494 0.4331 MAHSVKILGVDSIPPSSSSLTESSVPLTFFDLFWFRFHPVERVFFYSLPEADDDSYFFDFVVPKLKDSLSLALQYFLPLAGNIIWPQESEKPFIKHNPGDGVLFTVAQSHADFKNISNYNSYNASESRALVPHLHISESSASILALQATLFPKRGFSVGISTHHAILDGKSSTMFMKLWAYLCKESKESNKSSSLPKELRPCIDRSVIKDPKGLDVKHLKLWAKMFIAAGSDANHAVRSVQILPEYTGTGNQELVQTTFTLNREDIENLRKRVLSLWEKVSKEEKNPEKPVKLSTFMLTCAHVLVCINQAIRLEESRKIIFAFPVDCRERLKPPIDPNYLGNCVSASMLPVDHEEIYSDGGVAFVSKKIYEEIESFKKDALGRMESALEFWNSVASAGHRIIGVAGSPRFGVYETDFGWGKPDKVEIPSVGTTGSIALAESRDGNGVEVGLVYPKHEMDLIAAAFYKGLRHRNSNGDSNGDININVNNRPEASPKQK* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01217 497 Pfam Transferase family 5 465 - -
Pte1g01217 497 PANTHER - 5 470 - -
Pte1g01217 497 MobiDBLite consensus disorder prediction 476 497 - -
Pte1g01217 497 Gene3D - 251 467 IPR023213 -
Pte1g01217 497 Gene3D - 5 232 IPR023213 -
Pte1g01217 497 SUPERFAMILY CoA-dependent acyltransferases 291 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01217 Pte-Chr1 33272460 33274293 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01217 31 422 Monolignol Biosynthesis Gene Families AT5G48930 25.432 1.28e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01217 - - qsa:O6P43_004395 453.751